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[逆转录转座子:体细胞中的自私DNA还是活跃的表观遗传参与者?]

[Retrotransposons: selfish DNA or active epigenetic players in somatic cells?].

作者信息

Guidez Fabien

机构信息

Inserm UMRS 1131, université Paris Diderot, institut universitaire d'hématologie (IUH), hôpital Saint-Louis, 1, avenue Claude Vellefaux, 75010 Paris, France.

出版信息

Med Sci (Paris). 2014 Jun-Jul;30(6-7):659-64. doi: 10.1051/medsci/20143006016. Epub 2014 Jul 11.

Abstract

Transposable elements (TE) represent around 40% of the human genome. They are endogenous mobile DNA sequences able to jump and duplicate in the host genome. TE have long been considered as "junk" DNA but are now believed to be important regulators of gene expression by participating to the establishment of the DNA methylation profile. Recent advances in genome sequencing reveals a higher transposition frequency and TE driven gene expression in somatic cells than previously thought. As TE propagation is deleterious and may be involved in oncogenic mechanisms, host cells have developed silencing mechanisms mainly described in germinal and embryonic cells. However, somatic cells are also proned to TE transposition and use specific mechanisms involving tumor suppressor proteins including p53, Rb and PLZF. These transcription factors specifically target genomic retrotransposon sequences, histone deacetylase and DNA methylase activities, inducing epigenetic modifications related to gene silencing. Thus, these transcription factors negatively regulate TE expression by the formation of DNA methylation profil in somatic cells possibly associated with oncogenic mechanisms.

摘要

转座元件(TE)约占人类基因组的40%。它们是能够在宿主基因组中跳跃和复制的内源性可移动DNA序列。长期以来,TE一直被视为“垃圾”DNA,但现在人们认为它们通过参与DNA甲基化谱的建立而成为基因表达的重要调节因子。基因组测序的最新进展表明,体细胞中的转座频率和TE驱动的基因表达比以前认为的要高。由于TE的传播是有害的,并且可能参与致癌机制,宿主细胞已经发展出主要在生殖细胞和胚胎细胞中描述的沉默机制。然而,体细胞也容易发生TE转座,并利用涉及肿瘤抑制蛋白(包括p53、Rb和PLZF)的特定机制。这些转录因子特异性地靶向基因组逆转座子序列、组蛋白脱乙酰酶和DNA甲基化酶活性,诱导与基因沉默相关的表观遗传修饰。因此,这些转录因子通过在体细胞中形成可能与致癌机制相关的DNA甲基化谱来负向调节TE表达。

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