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巴西利什曼原虫的硫氧还蛋白过氧化物酶:同源建模及黄酮类化合物的抗利什曼活性抑制作用

Tryparedoxin peroxidase of Leishmania braziliensis: homology modeling and inhibitory effects of flavonoids for anti-leishmanial activity.

作者信息

Gundampati Ravi Kumar, Sahu Shraddha, Shukla Ankita, Pandey Rajesh Kumar, Patel Monika, Banik Rathindra Mohan, Jagannadham Medicherla Venkata

机构信息

Molecular Biology Unit, Institute of Medical Sciences, Banaras Hindu University, Varanasi-221005, India.

School of Biochemical Engineering, Indian Institute of Technology (BHU), Varanasi-221005, India.

出版信息

Bioinformation. 2014 Jun 30;10(6):353-7. doi: 10.6026/97320630010353. eCollection 2014.

Abstract

Inhibition of the Tryparedoxin peroxidase interaction has been becomes a new therapeutic strategy in leishmaniasis. Docking analysis was carried out to study the effects of quercetin and taxifolin on Tryparedoxin Peroxidase (TryP). Tryparedoxin peroxidase of Trypanosomatidae functions as antioxidants through their Peroxidase and peroxynitrite reductase activities. The 3D models of Tryparedoxin Peroxidase of Leishmania braziliensis (L. braziliensis TryP) was modeled using the template Tryparedoxin Peroxidase I from Leishmania Major (L. Major TryPI) (PDB ID: 3TUE). Further, we evaluated for TryP inhibitory activity of flavonoids such as quercetin and taxifolin using in silico docking studies. Docking results showed the binding energies of - 11.8601and -8.0851 for that quercetin and taxifolin respectively. Flavonoids contributed better L. braziliensis TryP inhibitory activity because of its structural parameters. Thus, from our in silico studies we identify that quercetin and taxifolin posses anti-leishmanial acitivities mediated through TryP inhibition mechanism.

摘要

抑制锥虫硫氧还蛋白过氧化物酶相互作用已成为治疗利什曼病的一种新策略。进行对接分析以研究槲皮素和紫杉叶素对锥虫硫氧还蛋白过氧化物酶(TryP)的影响。锥虫科的锥虫硫氧还蛋白过氧化物酶通过其过氧化物酶和过氧亚硝酸盐还原酶活性发挥抗氧化剂的作用。使用来自硕大利什曼原虫的锥虫硫氧还蛋白过氧化物酶I(硕大利什曼原虫TryPI)(PDB ID:3TUE)作为模板,对巴西利什曼原虫的锥虫硫氧还蛋白过氧化物酶(巴西利什曼原虫TryP)的三维模型进行建模。此外,我们使用计算机对接研究评估了槲皮素和紫杉叶素等黄酮类化合物对TryP的抑制活性。对接结果显示槲皮素和紫杉叶素的结合能分别为-11.8601和-8.0851。黄酮类化合物因其结构参数而具有更好的巴西利什曼原虫TryP抑制活性。因此,从我们的计算机研究中我们确定槲皮素和紫杉叶素具有通过TryP抑制机制介导的抗利什曼活性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c29f/4110426/7ff4f8e5c570/97320630010353F1.jpg

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