Pardo Cristina, Lopez Lua, Peña Viviana, Hernández-Kantún Jazmin, Le Gall Line, Bárbara Ignacio, Barreiro Rodolfo
Departamento de Biología Animal, Biología Vegetal y Ecología, Facultad de Ciencias, Universidade da Coruña, A Coruña, Spain.
Departamento de Biología Animal, Biología Vegetal y Ecología, Facultad de Ciencias, Universidade da Coruña, A Coruña, Spain; Phycology Research Group, Ghent University, Ghent, Belgium; Unité Mixte de Recherche 7205, Equipe "Exploration, Espèces et Evolution", Muséum National d'Histoire Naturelle, Paris, France.
PLoS One. 2014 Aug 11;9(8):e104073. doi: 10.1371/journal.pone.0104073. eCollection 2014.
Maerl beds are sensitive biogenic habitats built by an accumulation of loose-lying, non-geniculate coralline algae. While these habitats are considered hot-spots of marine biodiversity, the number and distribution of maerl-forming species is uncertain because homoplasy and plasticity of morphological characters are common. As a result, species discrimination based on morphological features is notoriously challenging, making these coralline algae the ideal candidates for a DNA barcoding study. Here, mitochondrial (COI-5P DNA barcode fragment) and plastidial (psbA gene) sequence data were used in a two-step approach to delimit species in 224 collections of maerl sampled from Svalbard (78°96'N) to the Canary Islands (28°64'N) that represented 10 morphospecies from four genera and two families. First, the COI-5P dataset was analyzed with two methods based on distinct criteria (ABGD and GMYC) to delineate 16 primary species hypotheses (PSHs) arranged into four major lineages. Second, chloroplast (psbA) sequence data served to consolidate these PSHs into 13 secondary species hypotheses (SSHs) that showed biologically plausible ranges. Using several lines of evidence (e.g. morphological characters, known species distributions, sequences from type and topotype material), six SSHs were assigned to available species names that included the geographically widespread Phymatolithon calcareum, Lithothamnion corallioides, and L. glaciale; possible identities of other SSHs are discussed. Concordance between SSHs and morphospecies was minimal, highlighting the convenience of DNA barcoding for an accurate identification of maerl specimens. Our survey indicated that a majority of maerl forming species have small distribution ranges and revealed a gradual replacement of species with latitude.
珊瑚藻床是由松散堆积的非膝曲状珊瑚藻形成的敏感生物栖息地。虽然这些栖息地被认为是海洋生物多样性的热点地区,但由于形态特征的同塑性和可塑性很常见,形成珊瑚藻的物种数量和分布情况尚不确定。因此,基于形态特征进行物种鉴别极具挑战性,这使得这些珊瑚藻成为DNA条形码研究的理想候选对象。在这里,线粒体(COI-5P DNA条形码片段)和质体(psbA基因)序列数据被用于两步法,以界定从斯瓦尔巴群岛(北纬78°96')到加那利群岛(北纬28°64')采集的224份珊瑚藻样本中的物种,这些样本代表了来自四个属和两个科的10个形态种。首先,使用基于不同标准的两种方法(ABGD和GMYC)对COI-5P数据集进行分析,以划定16个主要物种假说(PSH),这些假说被分为四个主要谱系。其次,叶绿体(psbA)序列数据用于将这些PSH整合为13个次要物种假说(SSH),这些假说显示出生物学上合理的范围。利用多条证据线(如形态特征、已知物种分布、模式标本和地模标本的序列),6个SSH被赋予了可用的物种名称,其中包括地理分布广泛的钙质叶状藻、珊瑚状石枝藻和冰川石枝藻;还讨论了其他SSH可能的身份。SSH与形态种之间的一致性极小,突出了DNA条形码在准确鉴定珊瑚藻标本方面的便利性。我们的调查表明,大多数形成珊瑚藻的物种分布范围较小,并揭示了物种随纬度的逐渐更替。