Flynn Susan C, Lindgren Danielle E, Hougland James L
Syracuse University Department of Chemistry, 1-014 Center for Science and Technology, Syracuse, NY 13244-4100 (USA).
Chembiochem. 2014 Oct 13;15(15):2205-10. doi: 10.1002/cbic.201402239. Epub 2014 Sep 2.
Prenylation is a post-translational modification wherein an isoprenoid group is attached to a protein substrate by a protein prenyltransferase. Hundreds of peptide sequences are in vitro substrates for protein farnesyltransferase (FTase), but it remains unknown which of these sequences can successfully compete for in vivo prenylation. Translating in vitro studies to predict in vivo protein farnesylation requires determining the minimum reactivity needed for modification by FTase within the cell. Towards this goal, we developed a reporter protein series spanning several orders of magnitude in FTase reactivity as a calibrated sensor for endogenous FTase activity. Our approach provides a minimally invasive method to monitor changes in cellular FTase activity in response to environmental or genetic factors. Determining the reactivity "threshold" for in vivo prenylation will help define the prenylated proteome and identify prenylation-dependent pathways for therapeutic targeting.
异戊二烯化是一种翻译后修饰,其中类异戊二烯基团通过蛋白质异戊二烯基转移酶连接到蛋白质底物上。数百个肽序列是蛋白质法尼基转移酶(FTase)的体外底物,但这些序列中哪些能够成功竞争体内异戊二烯化仍不清楚。将体外研究转化为预测体内蛋白质法尼基化需要确定细胞内FTase修饰所需的最小反应性。为了实现这一目标,我们开发了一系列报告蛋白,其FTase反应性跨越几个数量级,作为内源性FTase活性的校准传感器。我们的方法提供了一种微创方法,以监测细胞FTase活性响应环境或遗传因素的变化。确定体内异戊二烯化的反应性“阈值”将有助于定义异戊二烯化蛋白质组,并识别用于治疗靶向的异戊二烯化依赖性途径。