Barone Vincenzo, Biczysko Malgorzata, Borkowska-Panek Monika, Bloino Julien
Scuola Normale Superiore, Piazza dei Cavalieri 7, 56126 Pisa (Italy).
Chemphyschem. 2014 Oct 20;15(15):3355-64. doi: 10.1002/cphc.201402300. Epub 2014 Sep 2.
The subtle interplay of several different effects means that the interpretation and analysis of experimental spectra in terms of structural and dynamic characteristics is a challenging task. In this context, theoretical studies can be helpful, and as such, computational spectroscopy is rapidly evolving from a highly specialized research field toward a versatile and widespread tool. However, in the case of electronic spectra (e.g. UV/Vis, circular dichroism, photoelectron, and X-ray spectra), the most commonly used methods still rely on the computation of vertical excitation energies, which are further convoluted to simulate line shapes. Such treatment completely neglects the influence of nuclear motions, despite the well-recognized notion that a proper account of vibronic effects is often mandatory to correctly interpret experimental findings. Development and validation of improved models rooted into density functional theory (DFT) and its time-dependent extension (TD-DFT) is of course instrumental for the optimal balance between reliability and favorable scaling with the number of electrons. However, the implementation of easy-to-use and effective procedures to simulate vibrationally resolved electronic spectra, and their availability to a wide community of users, is at least equally important for reliable simulations of spectral line shapes for compounds of biological and technological interest. Here, such an approach has been applied to the study of the UV/Vis spectra of chlorophyll a. The results show that properly tailored approaches are feasible for state-of-the-art computational spectroscopy studies, and allow, with affordable computational resources, vibrational and environmental effects on the spectral line shapes to be taken into account for large systems.
几种不同效应之间微妙的相互作用意味着,根据结构和动力学特征对实验光谱进行解释和分析是一项具有挑战性的任务。在这种情况下,理论研究可能会有所帮助,因此,计算光谱学正迅速从一个高度专业化的研究领域发展成为一种通用且广泛应用的工具。然而,就电子光谱(例如紫外/可见光谱、圆二色光谱、光电子能谱和X射线光谱)而言,最常用的方法仍然依赖于垂直激发能的计算,然后进一步进行卷积以模拟线形。尽管人们普遍认识到,正确考虑振动电子效应通常是正确解释实验结果所必需的,但这种处理方法完全忽略了核运动的影响。基于密度泛函理论(DFT)及其含时扩展(TD-DFT)开发和验证改进模型,对于在可靠性和与电子数的良好标度之间实现最佳平衡当然是有帮助的。然而,实施易于使用且有效的程序来模拟振动分辨的电子光谱,并使其可供广大用户使用,对于可靠模拟具有生物学和技术意义的化合物的光谱线形至少同样重要。在此,这种方法已应用于叶绿素a的紫外/可见光谱研究。结果表明,对于前沿的计算光谱学研究,适当定制的方法是可行的,并且在可承受的计算资源下,能够考虑大体系光谱线形的振动和环境效应。