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利用通用M13标记的绿海胆(Strongylocentrotus droebachiensis)新微卫星位点

New microsatellite loci for the green sea urchin Strongylocentrotus droebachiensis using universal M13 labelled markers.

作者信息

Anglès d'Auriac Marc B, Hobæk Anders, Christie Hartvig, Gundersen Hege, Fagerli Camilla With, Haugstetter Johannes, Norderhaug Kjell Magnus

机构信息

Norwegian Institute for Water Research, N-0349 Oslo, Norway.

出版信息

BMC Res Notes. 2014 Oct 7;7:699. doi: 10.1186/1756-0500-7-699.

Abstract

BACKGROUND

The green sea urchin Strongylocentrotus droebachiensis has a wide circumpolar distribution and plays a key role in coastal ecosystems worldwide by destructively grazing macroalgae beds and turn them into marine deserts, so-called barren grounds. In the past decades, large established kelp forests have been overgrazed and transformed to such barren grounds on the Norwegian coast. This has important repercussions for the coastal diversity and production, including reproduction of several fish species relying on the kelp forests as nurseries. Genetic diversity is an important parameter for the study and further anticipation of this large scale phenomenon.

FINDINGS

Microsatellites were developed using a Norwegian S. droebachiensis individual primarily for the study of Northeast Atlantic populations. The 10 new microsatellite loci were amplified using M13 forward tails, enabling the use of M13 fluorescent tagged primers for multiplex reading. Among these loci, 2 acted polysomic and should therefore not be considered useful for population genetic analysis. We screened 96 individuals sampled from 4 different sites along the Norwegian coast which have shown unexpected diversity.

CONCLUSIONS

The new microsatellite loci should be a useful resource for further research into connectivity among S. droebachiensis populations, and assessing the risks for spreading and new overgrazing events.

摘要

背景

绿海胆(Strongylocentrotus droebachiensis)分布于广阔的环极地区,通过大量啃食大型海藻床并将其转变为所谓的海洋荒漠(即贫瘠地),在全球沿海生态系统中发挥着关键作用。在过去几十年里,挪威海岸大片已形成的海带森林遭到过度啃食,转变为了这样的贫瘠地。这对沿海生物多样性和生产力产生了重要影响,包括一些依赖海带森林作为育幼场所的鱼类的繁殖。遗传多样性是研究和进一步预测这一大规模现象的重要参数。

研究结果

利用一只挪威绿海胆个体开发了微卫星,主要用于研究东北大西洋种群。使用M13正向尾对10个新的微卫星位点进行了扩增,从而能够使用M13荧光标记引物进行多重读取。在这些位点中,有2个表现为多体遗传,因此不应被视为对种群遗传分析有用。我们对从挪威海岸4个不同地点采集的96个个体进行了筛选,这些个体显示出了意外的多样性。

结论

新的微卫星位点应是进一步研究绿海胆种群间连通性以及评估扩散风险和新的过度啃食事件的有用资源。

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