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巨大脱硫弧菌黄嘌呤氧化酶家族成员醛氧化还原酶中钼与近端FeS中心之间的各向同性交换相互作用:天然样品和多元醇抑制样品的电子顺磁共振和量子力学/分子力学研究

Isotropic exchange interaction between Mo and the proximal FeS center in the xanthine oxidase family member aldehyde oxidoreductase from Desulfovibrio gigas on native and polyalcohol inhibited samples: an EPR and QM/MM study.

作者信息

Gómez María C, Neuman Nicolás I, Dalosto Sergio D, González Pablo J, Moura José J G, Rizzi Alberto C, Brondino Carlos D

机构信息

Departamento de Física, Facultad de Bioquímica y Ciencias Biológicas, Universidad Nacional del Litoral, Ciudad Universitaria, Paraje El Pozo, S3000ZAA, Santa Fe, Argentina.

出版信息

J Biol Inorg Chem. 2015 Mar;20(2):233-42. doi: 10.1007/s00775-014-1204-8. Epub 2014 Oct 25.

DOI:10.1007/s00775-014-1204-8
PMID:25344343
Abstract

Aldehyde oxidoreductase from Desulfovibrio gigas (DgAOR) is a homodimeric molybdenum-containing protein that catalyzes the hydroxylation of aldehydes to carboxylic acids and contains a Mo-pyranopterin active site and two FeS centers called FeS 1 and FeS 2. The electron transfer reaction inside DgAOR is proposed to be performed through a chemical pathway linking Mo and the two FeS clusters involving the pyranopterin ligand. EPR studies performed on reduced as-prepared DgAOR showed that this pathway is able to transmit very weak exchange interactions between Mo(V) and reduced FeS 1. Similar EPR studies but performed on DgAOR samples inhibited with glycerol and ethylene glycol showed that the value of the exchange coupling constant J increases ~2 times upon alcohol inhibition. Structural studies in these DgAOR samples have demonstrated that the Mo-FeS 1 bridging pathway does not show significant differences, confirming that the changes in J observed upon inhibition cannot be ascribed to structural changes associated neither with pyranopterin and FeS 1 nor with changes in the electronic structure of FeS 1, as its EPR properties remain unchanged. Theoretical calculations indicate that the changes in J detected by EPR are related to changes in the electronic structure of Mo(V) determined by the replacement of the OHx labile ligand for an alcohol molecule. Since the relationship between electron transfer rate and isotropic exchange interaction, the present results suggest that the intraenzyme electron transfer process mediated by the pyranopterin moiety is governed by a Mo ligand-based regulatory mechanism.

摘要

巨大脱硫弧菌的醛氧化还原酶(DgAOR)是一种同二聚体含钼蛋白,可催化醛羟基化为羧酸,含有一个钼-吡喃蝶呤活性位点和两个称为FeS 1和FeS 2的铁硫中心。DgAOR内部的电子转移反应被认为是通过一条连接钼和两个铁硫簇的化学途径进行的,该途径涉及吡喃蝶呤配体。对还原态的初始制备DgAOR进行的电子顺磁共振(EPR)研究表明,该途径能够传递钼(V)和还原态FeS 1之间非常微弱的交换相互作用。对用甘油和乙二醇抑制的DgAOR样品进行的类似EPR研究表明,在酒精抑制后,交换耦合常数J的值增加了约2倍。对这些DgAOR样品的结构研究表明,钼-FeS 1桥接途径没有显著差异,这证实了抑制后观察到的J的变化不能归因于与吡喃蝶呤和FeS 1相关的结构变化,也不能归因于FeS 1电子结构的变化,因为其EPR性质保持不变。理论计算表明,EPR检测到的J的变化与钼(V)电子结构的变化有关,这种变化是由醇分子取代OHx不稳定配体引起的。由于电子转移速率与各向同性交换相互作用之间的关系,目前的结果表明,由吡喃蝶呤部分介导的酶内电子转移过程受基于钼配体的调节机制控制。

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