1] Centre for Integrative Biology (CBI), Department of Integrated Structural Biology, IGBMC (Institute of Genetics and of Molecular and Cellular Biology), 1 rue Laurent Fries, BP 10142, 67404 Illkirch, France [2] Centre National de la Recherche Scientifique (CNRS) UMR 7104, 67404 Illkirch, France [3] Institut National de la Santé et de la Recherche Médicale (INSERM), 67404 Illkirch, France [4] Université de Strasbourg, 67400 Strasbourg, France.
Institute of Protein Research, Russian Academy of Sciences, 142290 Moscow, Russia.
Nat Commun. 2014 Nov 7;5:5294. doi: 10.1038/ncomms6294.
During protein synthesis, several ribosomes bind to a single messenger RNA (mRNA) forming large macromolecular assemblies called polyribosomes. Here we report the detailed molecular structure of a 100 MDa eukaryotic poly-ribosome complex derived from cryo electron tomography, sub-tomogram averaging and pseudo-atomic modelling by crystal structure fitting. The structure allowed the visualization of the three functional parts of the polysome assembly, the central core region that forms a rather compact left-handed supra-molecular helix, and the more open regions that harbour the initiation and termination sites at either ends. The helical region forms a continuous mRNA channel where the mRNA strand bridges neighbouring exit and entry sites of the ribosomes and prevents mRNA looping between ribosomes. This structure provides unprecedented insights into protein- and RNA-mediated inter-ribosome contacts that involve conserved sites through 40S subunits and long protruding RNA expansion segments, suggesting a role in stabilizing the overall polyribosomal assembly.
在蛋白质合成过程中,几个核糖体结合到一个信使 RNA(mRNA)上,形成称为多核糖体的大型大分子组装体。在这里,我们通过低温电子断层扫描、亚断层平均和晶体结构拟合的拟原子建模,报告了一个来自真核生物的 100MDa 多核糖体复合物的详细分子结构。该结构允许可视化核糖体组装的三个功能部分,即形成相当紧凑的左手超分子螺旋的中心核心区域,以及容纳起始和终止位点的更开放区域。螺旋区域形成一个连续的 mRNA 通道,其中 mRNA 链桥接核糖体的相邻出口和入口位点,并防止 mRNA 在核糖体之间形成环。该结构提供了前所未有的见解,即涉及 40S 亚基和长突出 RNA 扩展片段的保守部位的蛋白质和 RNA 介导的核糖体间接触,这表明其在稳定整个多核糖体组装体中发挥作用。