Whelan Nathan V, Kocot Kevin M, Santos Scott R, Halanych Kenneth M
Department of Biological Sciences, Molette Biology Laboratory for Environmental and Climate Change Studies, Auburn University, Auburn, Alabama
Department of Biological Sciences, Molette Biology Laboratory for Environmental and Climate Change Studies, Auburn University, Auburn, Alabama Present address: School of Biological Sciences, University of Queensland, Brisbane, QLD, Australia.
Genome Biol Evol. 2014 Nov 27;6(12):3314-25. doi: 10.1093/gbe/evu258.
Nemerteans are one of few animal groups that have evolved the ability to utilize toxins for both defense and subduing prey, but little is known about specific nemertean toxins. In particular, no study has identified specific toxin genes even though peptide toxins are known from some nemertean species. Information about toxin genes is needed to better understand evolution of toxins across animals and possibly provide novel targets for pharmaceutical and industrial applications. We sequenced and annotated transcriptomes of two free-living and one commensal nemertean and annotated an additional six publicly available nemertean transcriptomes to identify putative toxin genes. Approximately 63-74% of predicted open reading frames in each transcriptome were annotated with gene names, and all species had similar percentages of transcripts annotated with each higher-level GO term. Every nemertean analyzed possessed genes with high sequence similarities to known animal toxins including those from stonefish, cephalopods, and sea anemones. One toxin-like gene found in all nemerteans analyzed had high sequence similarity to Plancitoxin-1, a DNase II hepatotoxin that may function well at low pH, which suggests that the acidic body walls of some nemerteans could work to enhance the efficacy of protein toxins. The highest number of toxin-like genes found in any one species was seven and the lowest was three. The diversity of toxin-like nemertean genes found here is greater than previously documented, and these animals are likely an ideal system for exploring toxin evolution and industrial applications of toxins.
纽形动物是少数进化出利用毒素进行防御和制服猎物能力的动物类群之一,但对纽形动物的特定毒素却知之甚少。特别是,尽管已知一些纽形动物物种存在肽类毒素,但尚无研究鉴定出特定的毒素基因。为了更好地理解动物毒素的进化,并可能为制药和工业应用提供新的靶点,需要有关毒素基因的信息。我们对两种自由生活的纽形动物和一种共生纽形动物的转录组进行了测序和注释,并对另外六个公开可用的纽形动物转录组进行了注释,以鉴定推定的毒素基因。每个转录组中约63%-74%的预测开放阅读框都用基因名称进行了注释,并且所有物种中用每个高级基因本体术语注释的转录本百分比相似。每一种分析的纽形动物都拥有与已知动物毒素具有高度序列相似性的基因,这些毒素包括来自石头鱼、头足类动物和海葵的毒素。在所有分析的纽形动物中发现的一个毒素样基因与Planctoxin-1具有高度序列相似性,Planctoxin-1是一种DNase II肝毒素,可能在低pH值下发挥良好作用,这表明一些纽形动物的酸性体壁可能有助于提高蛋白质毒素的功效。在任何一个物种中发现的毒素样基因数量最多为7个,最少为3个。这里发现的纽形动物毒素样基因的多样性比以前记录的要大,这些动物可能是探索毒素进化和毒素工业应用的理想系统。