Viral ssRNAs are indeed compact.
作者信息
Ben-Shaul A, Gelbart W M
机构信息
Institute of Chemistry and Fritz Haber Research Center, Hebrew University of Jerusalem, Jerusalem, Israel.
Department of Chemistry and Biochemistry, University of California, Los Angeles, Los Angeles, California.
出版信息
Biophys J. 2015 Jan 6;108(1):14-6. doi: 10.1016/j.bpj.2014.11.010.
Abstract
摘要
相似文献
1
Viral ssRNAs are indeed compact.病毒单链核糖核酸确实很紧密。
Biophys J. 2015 Jan 6;108(1):14-6. doi: 10.1016/j.bpj.2014.11.010.
2
Synonymous mutations reduce genome compactness in icosahedral ssRNA viruses.同义突变降低了二十面体单链RNA病毒的基因组紧凑性。
Biophys J. 2015 Jan 6;108(1):194-202. doi: 10.1016/j.bpj.2014.10.070.
3
RNA binding specificity of Ebola virus transcription factor VP30.埃博拉病毒转录因子VP30的RNA结合特异性
RNA Biol. 2016 Sep;13(9):783-98. doi: 10.1080/15476286.2016.1194160. Epub 2016 Jun 17.
4
The 3' sequences required for incorporation of an engineered ssRNA into the Reovirus genome.将工程化单链RNA整合到呼肠孤病毒基因组中所需的3'序列。
Virol J. 2006 Jan 3;3:1. doi: 10.1186/1743-422X-3-1.
5
Both RNA rearrangement and point mutation contribute to repair of defective chimeric viral genomes to form functional hybrid viruses in plants.RNA重排和点突变都有助于修复有缺陷的嵌合病毒基因组，从而在植物中形成功能性杂种病毒。
Virology. 1999 Jun 5;258(2):217-31. doi: 10.1006/viro.1999.9726.
6
Localizing the reovirus packaging signals using an engineered m1 and s2 ssRNA.利用工程化的m1和s2单链RNA定位呼肠孤病毒包装信号
Virology. 2007 Feb 5;358(1):89-97. doi: 10.1016/j.virol.2006.08.017. Epub 2006 Sep 20.
7
The rotavirus nonstructural protein NSP5 coordinates a [2Fe-2S] iron-sulfur cluster that modulates interaction to RNA.轮状病毒非结构蛋白 NSP5 协调 [2Fe-2S] 铁硫簇，从而调节与 RNA 的相互作用。
FASEB J. 2013 Mar;27(3):1074-83. doi: 10.1096/fj.12-217182. Epub 2012 Nov 27.
8
In vitro selection analysis of trans-acting HDV ribozyme.反式作用丁型肝炎病毒核酶的体外筛选分析
Nucleic Acids Symp Ser. 1995(34):115-6.
9
Controlled encapsidation of gold nanoparticles by a viral protein shell.病毒蛋白壳对金纳米颗粒的可控包裹
J Am Chem Soc. 2006 Apr 12;128(14):4502-3. doi: 10.1021/ja057332u.
10
Mutagenic analysis of the 5' arm of the influenza A virus virion RNA promoter defines the sequence requirements for endonuclease activity.甲型流感病毒病毒粒子RNA启动子5'臂的诱变分析确定了核酸内切酶活性的序列要求。
J Virol. 2001 Jan;75(1):134-42. doi: 10.1128/JVI.75.1.134-142.2001.
引用本文的文献
1
Functional Proximity across an mRNA.信使核糖核酸上的功能接近性
Biochemistry. 2025 Aug 12. doi: 10.1021/acs.biochem.5c00340.
2
Measuring the selective packaging of RNA molecules by viral coat proteins in cells.测量病毒衣壳蛋白在细胞中对RNA分子的选择性包装。
Proc Natl Acad Sci U S A. 2025 Aug 19;122(33):e2505190122. doi: 10.1073/pnas.2505190122. Epub 2025 Aug 11.
3
Virus self-assembly proceeds through contact-rich energy minima.病毒自组装通过富含接触的能量最小值进行。
Sci Adv. 2021 Nov 5;7(45):eabg0811. doi: 10.1126/sciadv.abg0811. Epub 2021 Nov 3.
4
Novel Fusari- and Toti-like Viruses, with Probable Different Origins, in the Plant Pathogenic Oomycete .新型镰刀菌和托蒂样病毒，可能起源不同，存在于植物病原卵菌中。
Viruses. 2021 Sep 25;13(10):1931. doi: 10.3390/v13101931.
5
RNA Viral Vectors for Accelerating Plant Synthetic Biology.用于加速植物合成生物学的RNA病毒载体
Front Plant Sci. 2021 Jun 23;12:668580. doi: 10.3389/fpls.2021.668580. eCollection 2021.
6
Structural basis for multifunctional roles of human Ints3 C-terminal domain.人 Ints3 C 末端结构域多功能作用的结构基础。
J Biol Chem. 2021 Jan-Jun;296:100112. doi: 10.1074/jbc.RA120.016393. Epub 2020 Dec 3.
7
Physical virology: From virus self-assembly to particle mechanics.物理病毒学：从病毒自组装到颗粒力学。
Wiley Interdiscip Rev Nanomed Nanobiotechnol. 2020 Jul;12(4):e1613. doi: 10.1002/wnan.1613. Epub 2020 Jan 20.
8
Large-Scale Synonymous Substitutions in Cucumber Mosaic Virus RNA 3 Facilitate Amino Acid Mutations in the Coat Protein.黄瓜花叶病毒 RNA3 中的大规模同义替换有助于外壳蛋白中的氨基酸突变。
J Virol. 2018 Oct 29;92(22). doi: 10.1128/JVI.01007-18. Print 2018 Nov 15.
本文引用的文献
1
Synonymous mutations reduce genome compactness in icosahedral ssRNA viruses.同义突变降低了二十面体单链RNA病毒的基因组紧凑性。
Biophys J. 2015 Jan 6;108(1):194-202. doi: 10.1016/j.bpj.2014.10.070.
2
Viral RNAs are unusually compact.病毒RNA异常紧凑。
PLoS One. 2014 Sep 4;9(9):e105875. doi: 10.1371/journal.pone.0105875. eCollection 2014.
3
Evidence that viral RNAs have evolved for efficient, two-stage packaging.病毒 RNA 已经进化为高效的两阶段包装的证据。
Proc Natl Acad Sci U S A. 2012 Sep 25;109(39):15769-74. doi: 10.1073/pnas.1204357109. Epub 2012 Sep 10.
4
In vitro quantification of the relative packaging efficiencies of single-stranded RNA molecules by viral capsid protein.通过病毒衣壳蛋白对单链 RNA 分子的相对包装效率进行体外定量。
J Virol. 2012 Nov;86(22):12271-82. doi: 10.1128/JVI.01695-12. Epub 2012 Sep 5.
5
Ionic strength-dependent persistence lengths of single-stranded RNA and DNA.离子强度依赖性的单链 RNA 和 DNA 的持久长度。
Proc Natl Acad Sci U S A. 2012 Jan 17;109(3):799-804. doi: 10.1073/pnas.1119057109. Epub 2011 Dec 27.
6
Visualizing large RNA molecules in solution.在溶液中可视化大型 RNA 分子。
RNA. 2012 Feb;18(2):284-99. doi: 10.1261/rna.027557.111. Epub 2011 Dec 21.
7
The size of RNA as an ideal branched polymer.RNA 的大小作为理想的支化聚合物。
J Chem Phys. 2011 Oct 21;135(15):155105. doi: 10.1063/1.3652763.
8
RAG: an update to the RNA-As-Graphs resource.RAG：RNA-As-Graphs 资源的更新。
BMC Bioinformatics. 2011 May 31;12:219. doi: 10.1186/1471-2105-12-219.
9
Predicting the sizes of large RNA molecules.预测大型RNA分子的大小。
Proc Natl Acad Sci U S A. 2008 Oct 21;105(42):16153-8. doi: 10.1073/pnas.0808089105. Epub 2008 Oct 9.
10
Portal motor velocity and internal force resisting viral DNA packaging in bacteriophage phi29.噬菌体phi29中的门控马达速度及抵抗病毒DNA包装的内力
Biophys J. 2008 Jan 1;94(1):159-67. doi: 10.1529/biophysj.107.104612. Epub 2007 Sep 7.
Zotero 插件