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人组织型纤溶酶原激活剂重组kringle 2结构域的1H NMR结构表征

1H NMR structural characterization of a recombinant kringle 2 domain from human tissue-type plasminogen activator.

作者信息

Byeon I J, Kelley R F, Llinás M

机构信息

Department of Chemistry, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213.

出版信息

Biochemistry. 1989 Nov 28;28(24):9350-60. doi: 10.1021/bi00450a016.

DOI:10.1021/bi00450a016
PMID:2558718
Abstract

The kringle 2 domain of human tissue-type plasminogen activator (t-PA) has been characterized via 1H NMR spectroscopy at 300 and 620 MHz. The experiments were performed on the isolated domain obtained by expression of the 174-263 portion of t-PA in Escherichia coli [Cleary et al. (1989) Biochemistry 28, 1884-1891]. The spectrum of t-PA kringle 2 is characteristic of a globular structure and shows overall similarity to that of the plasminogen (PGN) kringle 4. Spectral comparison with human and bovine PGN kringle 4 identifies side-chain resonances from Leu46, which afford a fingerprint of kringle folding, and from most of the aromatic ring spin systems. Assignment of signals arising from the His13, His48a, and His64 side chains, which are unique to t-PA kringle 2, was assisted by the availability of a His64----Tyr mutant. Ligand-binding studies confirm that t-PA kringle 2 binds L-lysine with an association constant Ka approximately 11.9 mM-1. The data indicate that homologous or conserved residues relative to those that compose the lysine-binding sites of PGN kringles 1 and 4 are involved in the binding of L-lysine to t-PA kringle 2. These include Tyr36 and, within the kringle inner loop, Trp62, His64, Trp72, and Tyr74. Acid/base titration of aromatic singlets in the presence of L-lysine yields pKa* approximately 6.25 and approximately 4.41 for His13 and His64, respectively, and shows that the His48a imidazole group does not protonate down to pH* approximately 4.3. Thus, the His48a and His64 side chains are in solvent-shielded locations. As observed for the PGN kringles, the Trp62 indole group titrates with pKa* approximately 4.60, which indicates proximity of the side chain to a titratable carboxyl group, most likely that of Asp57 at the binding site. Several labile NH protons of t-PA kringle 2 exhibit retarded H-exchange kinetics, requiring more than a week in 2H2O for full deuteration in the presence of L-lysine at 37 degrees C. This reveals that kringle 2 is endowed with a compact, dynamically stable conformation. Proton Overhauser experiments in 1H2O, centered on well-resolved NH resonances between 9.8 and 12 ppm, identify signals arising from the His48a imidazole NH3 proton and the three Trp indole NH1 protons. A strong dipolar interaction was observed among the Trp25 indole NH1, the Tyr50 amide NH, and the His48a imidazole CH2 protons, which affords evidence for an aromatic cluster in t-PA kringle 2 similar to that found at the hydrophobic kernel of PGN kringles.(ABSTRACT TRUNCATED AT 400 WORDS)

摘要

人组织型纤溶酶原激活剂(t-PA)的kringle 2结构域已通过300 MHz和620 MHz的1H NMR光谱进行了表征。实验是在通过在大肠杆菌中表达t-PA的174 - 263部分获得的分离结构域上进行的[克利里等人(1989年),《生物化学》28卷,第1884 - 1891页]。t-PA kringle 2的光谱具有球状结构的特征,并且总体上与纤溶酶原(PGN)kringle 4的光谱相似。与人和牛PGN kringle 4的光谱比较确定了来自Leu46的侧链共振,它提供了kringle折叠的指纹,以及来自大多数芳香环自旋系统的共振。His13、His48a和His64侧链产生的信号的归属(这些是t-PA kringle 2特有的)借助His64→Tyr突变体得以实现。配体结合研究证实t-PA kringle 2以约11.9 mM-1的缔合常数Ka结合L-赖氨酸。数据表明,相对于构成PGN kringles 1和4的赖氨酸结合位点的那些残基,同源或保守残基参与了L-赖氨酸与t-PA kringle 2的结合。这些残基包括Tyr36以及在kringle内环中的Trp62、His64、Trp72和Tyr74。在L-赖氨酸存在下对芳香单峰进行酸碱滴定,His13和His64的pKa分别约为6.25和约4.41,并且表明His48a咪唑基团在pH约为4.3时不会质子化。因此,His48a和His64侧链处于溶剂屏蔽位置。如在PGN kringles中观察到的那样,Trp62吲哚基团以约4.60的pKa*进行滴定,这表明侧链靠近一个可滴定的羧基,最有可能是结合位点处的Asp57的羧基。t-PA kringle 2的几个不稳定的NH质子表现出延迟的H交换动力学,在37℃下于2H2O中在L-赖氨酸存在下需要超过一周才能完全氘化。这表明kringle 2具有紧密、动态稳定的构象。在1H2O中以9.8至12 ppm之间分辨率良好的NH共振为中心进行的质子Overhauser实验,确定了来自His48a咪唑NH3质子和三个Trp吲哚NH1质子的信号。在Trp25吲哚NH1、Tyr50酰胺NH和His48a咪唑CH2质子之间观察到强烈的偶极相互作用,这为t-PA kringle 2中存在一个类似于在PGN kringles疏水核心中发现的芳香簇提供了证据。(摘要截断于400字)

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