• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

大型溞的全基因组胞嘧啶甲基化取决于基因型、环境及其相互作用。

Global cytosine methylation in Daphnia magna depends on genotype, environment, and their interaction.

作者信息

Asselman Jana, De Coninck Dieter I M, Vandegehuchte Michiel B, Jansen Mieke, Decaestecker Ellen, De Meester Luc, Vanden Bussche Julie, Vanhaecke Lynn, Janssen Colin R, De Schamphelaere Karel A C

机构信息

Laboratory for Environmental Toxicology and Aquatic Ecology (GhEnToxLab), Ghent University, Ghent, Belgium.

出版信息

Environ Toxicol Chem. 2015 May;34(5):1056-61. doi: 10.1002/etc.2887. Epub 2015 Mar 19.

DOI:10.1002/etc.2887
PMID:25639773
Abstract

The authors characterized global cytosine methylation levels in 2 different genotypes of the ecotoxicological model organism Daphnia magna after exposure to a wide array of biotic and abiotic environmental stressors. The present study aimed to improve the authors' understanding of the role of cytosine methylation in the organism's response to environmental conditions. The authors observed a significant genotype effect, an environment effect, and a genotype × environment effect. In particular, global cytosine methylation levels were significantly altered after exposure to Triops predation cues, Microcystis, and sodium chloride compared with control conditions. Significant differences between the 2 genotypes were observed when animals were exposed to Triops predation cues, Microcystis, Cryptomonas, and sodium chloride. Despite the low global methylation rate under control conditions (0.49-0.52%), global cytosine methylation levels upon exposure to Triops demonstrated a 5-fold difference between the genotypes (0.21% vs 1.02%). No effects were found in response to arsenic, cadmium, fish, lead, pH of 5.5, pH of 8, temperature, hypoxia, and white fat cell disease. The authors' results point to the potential role of epigenetic effects under changing environmental conditions such as predation (i.e., Triops), diet (i.e., Cryptomonas and Microcystis), and salinity. The results of the present study indicate that, despite global cytosine methylation levels being low, epigenetic effects may be important in environmental studies on Daphnia.

摘要

作者对生态毒理学模式生物大型溞的两种不同基因型在暴露于一系列生物和非生物环境应激源后的全基因组胞嘧啶甲基化水平进行了表征。本研究旨在增进作者对胞嘧啶甲基化在生物体对环境条件反应中的作用的理解。作者观察到显著的基因型效应、环境效应以及基因型×环境效应。特别是,与对照条件相比,暴露于鲎虫捕食线索、微囊藻和氯化钠后,全基因组胞嘧啶甲基化水平发生了显著变化。当动物暴露于鲎虫捕食线索、微囊藻、隐滴虫和氯化钠时,观察到两种基因型之间存在显著差异。尽管在对照条件下全基因组甲基化率较低(0.49 - 0.52%),但暴露于鲎虫后,两种基因型的全基因组胞嘧啶甲基化水平相差5倍(0.21%对1.02%)。未发现对砷、镉、鱼类、铅、pH值5.5、pH值8、温度、缺氧和白色脂肪细胞病有反应。作者的结果表明,在诸如捕食(即鲎虫)、饮食(即隐滴虫和微囊藻)和盐度等不断变化的环境条件下,表观遗传效应可能发挥潜在作用。本研究结果表明,尽管全基因组胞嘧啶甲基化水平较低,但表观遗传效应在大型溞的环境研究中可能很重要。

相似文献

1
Global cytosine methylation in Daphnia magna depends on genotype, environment, and their interaction.大型溞的全基因组胞嘧啶甲基化取决于基因型、环境及其相互作用。
Environ Toxicol Chem. 2015 May;34(5):1056-61. doi: 10.1002/etc.2887. Epub 2015 Mar 19.
2
Bisulfite Sequencing with Daphnia Highlights a Role for Epigenetics in Regulating Stress Response to Microcystis through Preferential Differential Methylation of Serine and Threonine Amino Acids.利用溞类进行亚硫酸氢盐测序,强调了通过丝氨酸和苏氨酸氨基酸的优先差异甲基化来调控对微囊藻应激反应的表观遗传学作用。
Environ Sci Technol. 2017 Jan 17;51(2):924-931. doi: 10.1021/acs.est.6b03870. Epub 2016 Dec 28.
3
Natural variability and modulation by environmental stressors of global genomic cytosine methylation levels in a freshwater crustacean, Gammarus fossarum.淡水甲壳动物罗氏沼虾基因组胞嘧啶整体甲基化水平的自然变异及其受环境胁迫的调控。
Aquat Toxicol. 2018 Dec;205:11-18. doi: 10.1016/j.aquatox.2018.09.015. Epub 2018 Oct 2.
4
Genome-wide transcription profiles reveal genotype-dependent responses of biological pathways and gene-families in Daphnia exposed to single and mixed stressors.全基因组转录谱揭示了暴露于单一和混合胁迫下的溞属生物途径和基因家族的基因型依赖性反应。
Environ Sci Technol. 2014 Mar 18;48(6):3513-22. doi: 10.1021/es4053363. Epub 2014 Feb 26.
5
An investigation of the inter-clonal variation of the interactive effects of cadmium and Microcystis aeruginosa on the reproductive performance of Daphnia magna.调查镉和铜绿微囊藻对大型溞生殖性能的交互作用的种间变异。
Aquat Toxicol. 2013 Sep 15;140-141:425-31. doi: 10.1016/j.aquatox.2013.07.005. Epub 2013 Jul 18.
6
Interclonal proteomic responses to predator exposure in Daphnia magna may depend on predator composition of habitats.大型溞对捕食者暴露的克隆间蛋白质组学反应可能取决于栖息地的捕食者组成。
Mol Ecol. 2015 Aug;24(15):3901-17. doi: 10.1111/mec.13287. Epub 2015 Jul 20.
7
Temperature and food concentration have limited influence on the mixture toxicity of copper and Microcystis aeruginosa to Daphnia magna.温度和食物浓度对铜和铜绿微囊藻对大型溞的混合毒性影响有限。
Environ Toxicol Chem. 2016 Mar;35(3):742-9. doi: 10.1002/etc.3235. Epub 2016 Feb 16.
8
DNA methylation differs extensively between strains of the same geographical origin and changes with age in Daphnia magna.同一地理来源的品系之间的 DNA 甲基化差异很大,并且在大型溞(Daphnia magna)中随年龄而变化。
Epigenetics Chromatin. 2021 Jan 6;14(1):4. doi: 10.1186/s13072-020-00379-z.
9
Genome-wide methylation is modified by caloric restriction in Daphnia magna.热量限制可改变大型溞基因组的甲基化状态。
BMC Genomics. 2019 Mar 8;20(1):197. doi: 10.1186/s12864-019-5578-4.
10
The importance of maintenance conditions of Daphnia magna Straus as a test organism for ecotoxicological analysis.大型溞(Daphnia magna Straus)作为生态毒理学分析测试生物的维持条件的重要性。
Environ Toxicol Chem. 2018 Feb;37(2):376-384. doi: 10.1002/etc.3956. Epub 2017 Dec 18.

引用本文的文献

1
Epigenetic and Gene Expression Responses of to Polyethylene and Polystyrene Microplastics.对聚乙烯和聚苯乙烯微塑料的表观遗传和基因表达反应
Molecules. 2025 Apr 3;30(7):1608. doi: 10.3390/molecules30071608.
2
Transgenerational epigenetic inheritance increases trait variation but is not adaptive.跨代表观遗传继承增加了性状变异,但不具有适应性。
Evolution. 2025 Jun 14;79(6):1033-1043. doi: 10.1093/evolut/qpaf050.
3
Maternal effects in the model system Daphnia: the ecological past meets the epigenetic future.水蚤模型系统中的母体效应:生态的过去与表观遗传的未来相遇。
Heredity (Edinb). 2025 Feb;134(2):142-154. doi: 10.1038/s41437-024-00742-w. Epub 2025 Jan 8.
4
Differences in alternative splicing events in the adaptive strategies of two Daphnia galeata genotypes induced by fish kairomones.鱼类信息素诱导两种大型溞 galeata 基因型适应策略中可变剪接事件的差异。
BMC Genomics. 2024 Jul 26;25(1):725. doi: 10.1186/s12864-024-10643-1.
5
Transgenerational epigenetic inheritance increases trait variation but is not adaptive.跨代表观遗传继承增加了性状变异,但并非适应性的。
bioRxiv. 2024 Apr 20:2024.04.15.589575. doi: 10.1101/2024.04.15.589575.
6
Comparative transcriptome analysis of two Daphnia galeata genotypes displaying contrasting phenotypic variation induced by fish kairomones in the same environment of the Han River, Korea.两种大型溞基因型的比较转录组分析,这些基因型在韩国汉江的同一环境中表现出由鱼类信息素诱导的表型变异。
BMC Genomics. 2023 Oct 2;24(1):580. doi: 10.1186/s12864-023-09701-x.
7
The hologenome of Daphnia magna reveals possible DNA methylation and microbiome-mediated evolution of the host genome.大型溞的全基因组揭示了宿主基因组可能的DNA甲基化和微生物群介导的进化。
Nucleic Acids Res. 2023 Oct 13;51(18):9785-9803. doi: 10.1093/nar/gkad685.
8
Adapting to climate with limited genetic diversity: Nucleotide, DNA methylation and microbiome variation among populations of the social spider Stegodyphus dumicola.适应遗传多样性有限的气候变化:社会蜘蛛 Stegodyphus dumicola 种群中的核苷酸、DNA 甲基化和微生物组变异。
Mol Ecol. 2022 Nov;31(22):5765-5783. doi: 10.1111/mec.16696. Epub 2022 Oct 2.
9
Additive and non-additive epigenetic signatures of natural hybridization between fish species with different mating systems.具有不同交配系统的鱼类种间自然杂交的加性和非加性表观遗传特征。
Epigenetics. 2022 Dec;17(13):2356-2365. doi: 10.1080/15592294.2022.2123014. Epub 2022 Sep 15.
10
Pollution induces epigenetic effects that are stably transmitted across multiple generations.污染会引发表观遗传效应,这种效应能在多代间稳定传递。
Evol Lett. 2022 Feb 3;6(2):118-135. doi: 10.1002/evl3.273. eCollection 2022 Apr.