Stathopoulou Maria G, Petrelis Alexandros M, Buxton Jessica L, Froguel Philippe, Blakemore Alexandra I F, Visvikis-Siest Sophie
UMR INSERM U1122, Interactions Gène-Environnement en Physiopathologie Cardio-Vasculaire (IGE-PCV), Université de Lorraine, Nancy, France.
Paediatr Perinat Epidemiol. 2015 Mar;29(2):146-50. doi: 10.1111/ppe.12173. Epub 2015 Feb 1.
Telomere length is associated with a large range of human diseases. Genome-wide association studies (GWAS) have identified genetic variants that are associated with leucocyte telomere length (LTL). However, these studies are limited to adult populations. Nevertheless, childhood is a crucial period for the determination of LTL, and the assessment of age-specific genetic determinants, although neglected, could be of great importance. Our aim was to provide insights and preliminary results on genetic determinants of LTL in children.
Healthy children (n = 322, age range = 6.75-17 years) with available GWAS data (Illumina Human CNV370-Duo array) were included. The LTL was measured using multiplex quantitative real-time polymerase chain reaction. Linear regression models adjusted for age, gender, parental age at child's birth, and body mass index were used to test the associations of LTL with polymorphisms identified in adult GWAS and to perform a discovery-only GWAS.
The previously GWAS-identified variants in adults were not associated with LTL in our paediatric sample. This lack of association was not due to possible interactions with age or gene × gene interactions. Furthermore, a discovery-only GWAS approach demonstrated six novel variants that reached the level of suggestive association (P ≤ 5 × 10(-5)) and explain a high percentage of children's LTL.
The study of genetic determinants of LTL in children may identify novel variants not previously identified in adults. Studies in large-scale children populations are needed for the confirmation of these results, possibly through a childhood consortium that could better handle the methodological challenges of LTL genetic epidemiology field.
端粒长度与多种人类疾病相关。全基因组关联研究(GWAS)已鉴定出与白细胞端粒长度(LTL)相关的基因变异。然而,这些研究仅限于成年人群体。尽管如此,儿童期是确定LTL的关键时期,对特定年龄的基因决定因素进行评估虽然被忽视,但可能非常重要。我们的目的是提供关于儿童LTL基因决定因素的见解和初步结果。
纳入了有可用GWAS数据(Illumina Human CNV370-Duo芯片)的健康儿童(n = 322,年龄范围 = 6.75 - 17岁)。使用多重定量实时聚合酶链反应测量LTL。采用针对年龄、性别、孩子出生时父母年龄和体重指数进行调整的线性回归模型,来测试LTL与成年GWAS中鉴定出的多态性之间的关联,并进行仅用于发现的GWAS。
在我们的儿科样本中,先前在成年GWAS中鉴定出的变异与LTL无关。这种缺乏关联并非由于与年龄的可能相互作用或基因×基因相互作用。此外,仅用于发现的GWAS方法显示有六个新变异达到了提示性关联水平(P≤5×10⁻⁵),并解释了儿童LTL的很大比例。
对儿童LTL基因决定因素的研究可能会鉴定出先前在成年人中未发现的新变异。需要在大规模儿童群体中进行研究以证实这些结果,可能通过一个儿童联盟来更好地应对LTL遗传流行病学领域的方法学挑战。