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用于鉴定抗金黄色葡萄球菌潜在疫苗候选物的计算机模拟分析。

In silico analysis for identifying potential vaccine candidates against Staphylococcus aureus.

作者信息

Delfani Somayeh, Imani Fooladi Abbas Ali, Mobarez Ashraf Mohabati, Emaneini Mohammad, Amani Jafar, Sedighian Hamid

机构信息

Department of Bacteriology, Faculty of Medical Sciences, Tarbiat Modares University, Tehran, Iran.

Applied Microbiology Research Center, Baqiyatallah University of Medical Sciences, Tehran, Iran.

出版信息

Clin Exp Vaccine Res. 2015 Jan;4(1):99-106. doi: 10.7774/cevr.2015.4.1.99. Epub 2015 Jan 30.

Abstract

PURPOSE

Staphylococcus aureus is one of the most important causes of nosocomial and community-acquired infections. The increasing incidence of multiple antibiotic-resistant S. aureus strains and the emergence of vancomycin resistant S. aureus strains have placed renewed interest on alternative means of prevention and control of infection. S. aureus produces a variety of virulence factors, so a multi-subunit vaccine will be more successful for preventing S. aureus infections than a mono-subunit vaccine.

MATERIALS AND METHODS

We selected three important virulence factors of S. aureus, clumping factor A (ClfA), iron-regulated surface determinant (IsdB), and gamma hemolysin (Hlg) that are potential candidates for vaccine development. We designed synthetic genes encoding the clfA, isdB, and hlg and used bioinformatics tools to predict structure of the synthetic construct and its stabilities. VaxiJen analysis of the protein showed a high antigenicity. Linear and conformational B-cell epitopes were identified.

RESULTS

The proteins encoded by these genes were useful as vaccine candidates against S. aureus infections.

CONCLUSION

In silico tools are highly suited to study, design, and evaluate vaccine strategies.

摘要

目的

金黄色葡萄球菌是医院感染和社区获得性感染最重要的病因之一。多重耐药金黄色葡萄球菌菌株的发病率不断上升以及耐万古霉素金黄色葡萄球菌菌株的出现,使得人们重新关注感染预防和控制的替代方法。金黄色葡萄球菌产生多种毒力因子,因此多亚基疫苗预防金黄色葡萄球菌感染比单亚基疫苗更有效。

材料与方法

我们选择了金黄色葡萄球菌的三种重要毒力因子,聚集因子A(ClfA)、铁调节表面决定簇(IsdB)和γ溶血素(Hlg),它们是疫苗开发的潜在候选物。我们设计了编码clfA、isdB和hlg的合成基因,并使用生物信息学工具预测合成构建体的结构及其稳定性。对该蛋白质的VaxiJen分析显示其具有高抗原性。鉴定了线性和构象性B细胞表位。

结果

这些基因编码的蛋白质可用作抗金黄色葡萄球菌感染的候选疫苗。

结论

计算机工具非常适合研究、设计和评估疫苗策略。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3709/4313115/b023c4cb8f17/cevr-4-99-g001.jpg

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