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移动平均分析在多靶点(定量)构效关系模型开发中的作用。

Role of moving average analysis for development of multi-target (Q)SAR models.

作者信息

Khatri N, Dutt R, Madan A K

机构信息

Faculty of Pharmaceutical Sciences, Pt. B.D. Sharma University of Health Sciences, Rohtak-124001, India.

出版信息

Mini Rev Med Chem. 2015;15(8):659-76. doi: 10.2174/1389557515666150219130554.

DOI:10.2174/1389557515666150219130554
PMID:25694075
Abstract

In modern drug discovery era, multi target- quantitative structure activity relationship [mt- (Q)SAR] approaches have emerged as novel and powerful alternatives in the field of in-silico drug design so as to facilitate the discovery of new chemical entities with multiple biological activities. Amongst various machine learning approaches, moving average analysis (MAA) has frequently exhibited high accuracy of prediction of diverse biological activities against different biological targets and experimental conditions. Role of MAA in developing (Q)SAR models for prediction of single/dual or multi target activity has been briefly reviewed in the present article. Subsequently, MAA was successfully utilized for developing mt-(Q)SAR models for simultaneous prediction of anti-Plasmodium falciparum and anti-Trypanosoma brucei rhodesiense activities of benzyl phenyl ether derivatives. The statistical significance of models was assessed through intercorrelation analysis, sensitivity, specificity and Matthew's correlation coefficient. Proposed MAA based models were also validated using test set. High predictability of the order of 80% to 95% amalgamated with safety (indicated by high value of selectivity index) of proposed mt-(Q)SAR models justifies use of MAA in developing models in order to obtain more realistic and accurate results for prediction of anti-protozal activity against multiple targets. Active ranges of the proposed models can play a significant role in the development of novel, potent, versatile and safe anti-protozoal drugs with improved profile in terms of both anti-Plasmodium falciparum and anti-Trypanosoma brucei rhodesiense activities.

摘要

在现代药物发现时代,多靶点定量构效关系[mt-(Q)SAR]方法已成为计算机辅助药物设计领域中新颖且强大的替代方法,以促进具有多种生物活性的新化学实体的发现。在各种机器学习方法中,移动平均分析(MAA)经常在针对不同生物靶点和实验条件预测多种生物活性方面表现出高精度。本文简要回顾了MAA在开发用于预测单靶点/双靶点或多靶点活性的(Q)SAR模型中的作用。随后,成功利用MAA开发了mt-(Q)SAR模型,用于同时预测苄基苯基醚衍生物的抗恶性疟原虫和抗罗德西亚布氏锥虫活性。通过相互关联分析、敏感性、特异性和马修斯相关系数评估模型的统计学意义。所提出的基于MAA的模型也使用测试集进行了验证。所提出的mt-(Q)SAR模型具有80%至95%的高预测性以及安全性(由高选择性指数值表明),这证明在开发模型时使用MAA能够获得更现实、准确的针对多种靶点的抗原虫活性预测结果。所提出模型的活性范围在开发新型、强效、通用且安全的抗原虫药物方面可发挥重要作用,这些药物在抗恶性疟原虫和抗罗德西亚布氏锥虫活性方面具有更好的特性。

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