Cerqueira Nuno M F S A, Pakhira Bholanath, Sarkar Sabyasachi
REQUIMTE, Departamento de Química, Faculdade de Ciências, Universidade do Porto, Rua do Campo Alegre s/n, 4169-007, Porto, Portugal,
J Biol Inorg Chem. 2015 Mar;20(2):323-35. doi: 10.1007/s00775-015-1237-7. Epub 2015 Jan 21.
Modeling of molybdoenzymes began even before the knowledge of the three-dimensional structure of these enzymes. The theoretical and experimental knowledge on these enzymes is vast and newer investigation is regularly pursued to understand the electronic aspect of these proteins using computational means. The present review deals with some unique observation regarding the structure, function and reactivity of some models and native proteins in rationalizing the choice of diverse substrates in seemingly similar enzymes such as Nap (nitrate reductase) and Fdh (formate dehydrogenase) and the dual form of a specific substrate of an enzyme like trimethylamine N-oxide reductase (TAMOR) and providing the electronic reason for the inhibition in the oxypurinol-inhibited xanthine oxidase (XO).
钼酶的建模甚至在人们了解这些酶的三维结构之前就已开始。关于这些酶的理论和实验知识非常丰富,并且人们经常进行新的研究,以通过计算手段了解这些蛋白质的电子方面。本综述涉及一些关于某些模型和天然蛋白质的结构、功能和反应性的独特观察结果,这些观察结果有助于合理化看似相似的酶(如Nap(硝酸还原酶)和Fdh(甲酸脱氢酶))中不同底物的选择,以及解释三甲胺N-氧化物还原酶(TAMOR)等酶的特定底物的双重形式,并为氧嘌呤醇抑制的黄嘌呤氧化酶(XO)中的抑制作用提供电子学原因。