Advantages and limitations of shot-gun proteomic analyses on Arabidopsis plants with altered MAPK signaling.
作者信息
Takáč Tomáš, Šamaj Jozef
机构信息
Department of Cell Biology, Faculty of Science, Centre of the Region Haná for Biotechnological and Agricultural Research, Palacký University Olomouc, Czech Republic.
出版信息
Front Plant Sci. 2015 Feb 25;6:107. doi: 10.3389/fpls.2015.00107. eCollection 2015.
Abstract
摘要
相似文献
1
Advantages and limitations of shot-gun proteomic analyses on Arabidopsis plants with altered MAPK signaling.
Front Plant Sci. 2015 Feb 25;6:107. doi: 10.3389/fpls.2015.00107. eCollection 2015.
2
Shot-Gun Proteomic Analysis on Roots of Arabidopsis Mutants Suggesting the Involvement of PLDα1 in Mitochondrial Protein Import, Vesicular Trafficking and Glucosinolate Biosynthesis.
Int J Mol Sci. 2018 Dec 26;20(1):82. doi: 10.3390/ijms20010082.
3
Identification of Phosphoinositide-Binding Protein PATELLIN2 as a Substrate of Arabidopsis MPK4 MAP Kinase during Septum Formation in Cytokinesis.
Plant Cell Physiol. 2016 Aug;57(8):1744-55. doi: 10.1093/pcp/pcw098. Epub 2016 May 19.
4
Auxin induces mitogenic activated protein kinase (MAPK) activation in roots of Arabidopsis seedlings.
Plant J. 2000 Dec;24(6):785-96. doi: 10.1046/j.1365-313x.2000.00921.x.
5
Identification of MAPK Substrates Using Quantitative Phosphoproteomics.
Methods Mol Biol. 2017;1578:133-142. doi: 10.1007/978-1-4939-6859-6_10.
6
Analysis of the expression protein profiles of lung squamous carcinoma cell using shot-gun proteomics strategy.
Med Oncol. 2009;26(2):215-21. doi: 10.1007/s12032-008-9109-4. Epub 2008 Nov 6.
7
Comparative proteomic study of Arabidopsis mutants mpk4 and mpk6.
Sci Rep. 2016 Jun 21;6:28306. doi: 10.1038/srep28306.
8
Arabidopsis mitogen-activated protein kinase MPK12 interacts with the MAPK phosphatase IBR5 and regulates auxin signaling.
Plant J. 2009 Mar;57(6):975-85. doi: 10.1111/j.1365-313X.2008.03741.x. Epub 2008 Dec 4.
9
Interplay Between Auxin and Cytokinin and Its Impact on Mitogen Activated Protein Kinase (MAPK).
Methods Mol Biol. 2017;1569:93-100. doi: 10.1007/978-1-4939-6831-2_7.
10
Plant MAP kinase pathways: how many and what for?
Biol Cell. 2001 Sep;93(1-2):81-7. doi: 10.1016/s0248-4900(01)01121-2.
引用本文的文献
1
Proteomic and Metabolomic Profiling of Recovering After Exposure to Simulated Low Earth Orbit Vacuum Conditions.
Front Microbiol. 2019 Apr 29;10:909. doi: 10.3389/fmicb.2019.00909. eCollection 2019.
2
Proteomic Analysis of Arabidopsis α Mutants Revealed an Important Role of Phospholipase D Alpha 1 in Chloroplast Biogenesis.
Front Plant Sci. 2019 Feb 18;10:89. doi: 10.3389/fpls.2019.00089. eCollection 2019.
3
Sufentanil protects the rat myocardium against ischemia-reperfusion injury via activation of the ERK1/2 pathway.
Cytotechnology. 2018 Feb;70(1):169-176. doi: 10.1007/s10616-017-0127-y. Epub 2017 Aug 30.
4
Genome-Wide Identification, Evolution, and Co-expression Network Analysis of Mitogen-Activated Protein Kinase Kinase Kinases in .
Front Plant Sci. 2016 Sep 16;7:1400. doi: 10.3389/fpls.2016.01400. eCollection 2016.
5
Comparative proteomic study of Arabidopsis mutants mpk4 and mpk6.
Sci Rep. 2016 Jun 21;6:28306. doi: 10.1038/srep28306.
6
Cellular reprogramming through mitogen-activated protein kinases.
Front Plant Sci. 2015 Oct 29;6:940. doi: 10.3389/fpls.2015.00940. eCollection 2015.
本文引用的文献
1
Sustained mitogen-activated protein kinase activation reprograms defense metabolism and phosphoprotein profile in Arabidopsis thaliana.
Front Plant Sci. 2014 Oct 20;5:554. doi: 10.3389/fpls.2014.00554. eCollection 2014.
2
Proteomic and biochemical analyses show a functional network of proteins involved in antioxidant defense of the Arabidopsis anp2anp3 double mutant.
J Proteome Res. 2014 Dec 5;13(12):5347-61. doi: 10.1021/pr500588c. Epub 2014 Oct 31.
3
Functional analysis of Arabidopsis immune-related MAPKs uncovers a role for MPK3 as negative regulator of inducible defences.
Genome Biol. 2014 Jun 30;15(6):R87. doi: 10.1186/gb-2014-15-6-r87.
4
Involvement of YODA and mitogen activated protein kinase 6 in Arabidopsis post-embryogenic root development through auxin up-regulation and cell division plane orientation.
New Phytol. 2014 Sep;203(4):1175-1193. doi: 10.1111/nph.12880. Epub 2014 Jun 13.
5
Affinity-based SDS PAGE identification of phosphorylated Arabidopsis MAPKs and substrates by acrylamide pendant Phos-Tag™.
Methods Mol Biol. 2014;1171:47-63. doi: 10.1007/978-1-4939-0922-3_5.
6
Salt-induced subcellular kinase relocation and seedling susceptibility caused by overexpression of Medicago SIMKK in Arabidopsis.
J Exp Bot. 2014 Jun;65(9):2335-50. doi: 10.1093/jxb/eru115. Epub 2014 Mar 19.
7
Stable isotope metabolic labeling-based quantitative phosphoproteomic analysis of Arabidopsis mutants reveals ethylene-regulated time-dependent phosphoproteins and putative substrates of constitutive triple response 1 kinase.
Mol Cell Proteomics. 2013 Dec;12(12):3559-82. doi: 10.1074/mcp.M113.031633. Epub 2013 Sep 16.
8
Vesicular trafficking and stress response coupled to PI3K inhibition by LY294002 as revealed by proteomic and cell biological analysis.
J Proteome Res. 2013 Oct 4;12(10):4435-48. doi: 10.1021/pr400466x. Epub 2013 Sep 9.
9
Knockout of AtMKK1 enhances salt tolerance and modifies metabolic activities in Arabidopsis.
Plant Signal Behav. 2013 May;8(5):e24206. doi: 10.4161/psb.24206. Epub 2013 Mar 19.
10
A versatile mass spectrometry-based method to both identify kinase client-relationships and characterize signaling network topology.
J Proteome Res. 2013 Feb 1;12(2):937-48. doi: 10.1021/pr3009995. Epub 2013 Jan 15.
Zotero 插件