You Cai, Zhang Li-Meng, Ji Si-Gui, Gao Jia-Ming, Zhang Cheng-Sheng, Kong Fan-Yu
Ying Yong Sheng Tai Xue Bao. 2014 Nov;25(11):3323-30.
The impact of inoculation with the biocontrol agent Bacillus subtilis on bacterial communities and bacterial diversity in rhizospheric soil of Nicotiana tabacum was assessed by constructing a 16S rRNA gene clone library and conducting amplified ribosomal DNA restriction analysis (ARDRA). The bacterial diversity was evaluated by coverage value (C), Shannon index (H), Pielou evenness index (E) and Margalef richness index (R). Phylogenetic analysis revealed that the inoculation significantly affected the composition of bacterial communities in tobacco rhizospheric soil. A total of twelve bacterial groups including Acidobacteria, Proteobacteria (including α-, β-, δ-, γ-Proteobacteria) , Planctomycetes, Firmicutes, Nitrospirae, Gemmatimonadetes, Actinobacteria, Chloroflexi and Bacteroidetes were detected to be shared by inoculated soil and control soil. The community composition and proportions of different bacteria in the communities showed significant variations between the two samples. The dominant bacteria were Acidobacteria (27.1%) and Proteobacteria (26.5%) in control soil, while in the inoculated soil Proteobacteria (38.0%) and Acidobacteria (29.6%) were dominant. B. subtilis inoculation increased the numbers of γ-Proteobacteria and α-Proteobacteria but reduced the numbers of bacterial groups such as β-Proteobacteria, Planctomycetes, Firmicutes. Diversity analysis showed that bacterial diversity was rich for both soil samples, and soil bacterial Shannon index and Margalef richness index were promoted after inoculation.
通过构建16S rRNA基因克隆文库并进行扩增核糖体DNA限制性分析(ARDRA),评估了接种生防菌枯草芽孢杆菌对烟草根际土壤细菌群落和细菌多样性的影响。通过覆盖率值(C)、香农指数(H)、皮洛均匀度指数(E)和玛格列夫丰富度指数(R)评估细菌多样性。系统发育分析表明,接种显著影响了烟草根际土壤细菌群落的组成。接种土壤和对照土壤共检测到12个细菌类群,包括酸杆菌门、变形菌门(包括α-、β-、δ-、γ-变形菌纲)、浮霉菌门、厚壁菌门、硝化螺旋菌门、芽单胞菌门、放线菌门、绿弯菌门和拟杆菌门。两个样品中不同细菌的群落组成和比例存在显著差异。对照土壤中的优势细菌是酸杆菌门(27.1%)和变形菌门(26.5%),而接种土壤中变形菌门(38.0%)和酸杆菌门(29.6%)占主导地位。接种枯草芽孢杆菌增加了γ-变形菌纲和α-变形菌纲的数量,但减少了β-变形菌纲、浮霉菌门、厚壁菌门等细菌类群的数量。多样性分析表明,两个土壤样品的细菌多样性都很丰富,接种后土壤细菌香农指数和玛格列夫丰富度指数均有所提高。