Manukovsky Nurit, Frydman Veronica, Goldfarb Daniella
Departments of †Chemical Physics and ‡Chemical Research Support, Weizmann Institute of Science , Rehovot 76100, Israel.
J Phys Chem B. 2015 Oct 29;119(43):13732-41. doi: 10.1021/acs.jpcb.5b03523. Epub 2015 Jun 5.
Although Gd(3+)-based spin labels have been shown to be an alternative to nitroxides for double electron-electron resonance (DEER) distance measurements at high fields, their ability to provide solvent accessibility information, as nitroxides do, has not been explored. In addition, the effect of the label type on the measured distance distribution has not been sufficiently characterized. In this work, we extended the applicability of Gd(3+) spin labels to solvent accessibility measurements on a peptide in model membranes, namely, large unilamellar vesicles (LUVs) using W-band (2)H Mims electron-nuclear double resonance (ENDOR) and electron spin echo envelope modulation (ESEEM) techniques and Gd(3+)-ADO3A-labeled melittin. In addition, we carried out Gd(3+)-Gd(3+) DEER distance measurements to probe the peptide conformation in solution and when bound to LUVs. A comparison with earlier results reported for the same system with nitroxide labels shows that, although in both cases the peptide binds parallel to the membrane surface, the Gd(3+)-ADO3A label tends to protrude from the membrane into the solvent, whereas the nitroxide does the opposite. This can be explained on the basis of the hydrophilicity of the Gd(3+)-ADO3A labels in contrast with the hydrophobicity of nitroxides. The distance distributions obtained from different labels are accordingly different, with the Gd(3+)-ADO3A yielding consistently broader distributions. These discrepancies are most pronounced when the peptide termini are labeled, which implies that such labeling positions may be inadvisible.
尽管基于Gd(3+)的自旋标记已被证明是在高场下进行双电子-电子共振(DEER)距离测量时替代氮氧化物的一种选择,但它们像氮氧化物那样提供溶剂可及性信息的能力尚未得到探索。此外,标记类型对测量的距离分布的影响也尚未得到充分表征。在这项工作中,我们将Gd(3+)自旋标记的适用性扩展到使用W波段(2)H Mims电子-核双共振(ENDOR)和电子自旋回波包络调制(ESEEM)技术以及Gd(3+)-ADO3A标记的蜂毒素,对模型膜中的一种肽,即大单层囊泡(LUVs)进行溶剂可及性测量。此外,我们进行了Gd(3+)-Gd(3+) DEER距离测量,以探测溶液中以及与LUVs结合时肽的构象。与早期报道的同一系统使用氮氧化物标记的结果相比表明,尽管在两种情况下肽都与膜表面平行结合,但Gd(3+)-ADO3A标记倾向于从膜突出到溶剂中,而氮氧化物则相反。这可以基于Gd(3+)-ADO3A标记的亲水性与氮氧化物的疏水性来解释。相应地,从不同标记获得的距离分布是不同的,Gd(3+)-ADO3A产生的分布始终更宽。当肽的末端被标记时,这些差异最为明显,这意味着这样的标记位置可能不可取。