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通过具有反馈的信号模块进行信息传递:一种微扰方法。

Information transfer through a signaling module with feedback: A perturbative approach.

作者信息

Aquino Gerardo, Zapotocky Martin

机构信息

Department of Life Sciences, Imperial College, SW7 2AZ London, UK.

Institute of Physiology of the Czech Academy of Sciences, Videnska 1083, 14220 Prague, Czech Republic.

出版信息

Biosystems. 2015 Oct;136:66-72. doi: 10.1016/j.biosystems.2015.08.001. Epub 2015 Aug 19.

Abstract

Signal transduction in biological cells is effected by signaling pathways that typically include multiple feedback loops. Here we analyze information transfer through a prototypical signaling module with biochemical feedback. The module switches stochastically between an inactive and active state; the input to the module governs the activation rate while the output (i.e., the product concentration) perturbs the inactivation rate. Using a novel perturbative approach, we compute the rate with which information about the input is gained from observation of the output. We obtain an explicit analytical result valid to first order in feedback strength and to second order in the strength of input. The total information gained during an extended time interval is found to depend on the feedback strength only through the total number of activation/inactivation events.

摘要

生物细胞中的信号转导是由通常包含多个反馈回路的信号通路实现的。在此,我们分析通过一个具有生化反馈的典型信号模块的信息传递。该模块在非活性和活性状态之间随机切换;模块的输入控制激活速率,而输出(即产物浓度)影响失活速率。使用一种新颖的微扰方法,我们计算从输出观测中获取关于输入信息的速率。我们得到了一个明确的解析结果,该结果在反馈强度的一阶和输入强度的二阶上有效。发现在延长的时间间隔内获得的总信息仅通过激活/失活事件的总数依赖于反馈强度。

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