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在锯缘果蝇远交群体中同时估计加性遗传方差和突变遗传方差。

Simultaneous Estimation of Additive and Mutational Genetic Variance in an Outbred Population of Drosophila serrata.

作者信息

McGuigan Katrina, Aguirre J David, Blows Mark W

机构信息

School of Biological Sciences, The University of Queensland, Brisbane QLD 4072, Australia

Institute of Natural and Mathematical Sciences, Massey University, Albany, Auckland 1011, New Zealand.

出版信息

Genetics. 2015 Nov;201(3):1239-51. doi: 10.1534/genetics.115.178632. Epub 2015 Sep 16.

Abstract

How new mutations contribute to genetic variation is a key question in biology. Although the evolutionary fate of an allele is largely determined by its heterozygous effect, most estimates of mutational variance and mutational effects derive from highly inbred lines, where new mutations are present in homozygous form. In an attempt to overcome this limitation, middle-class neighborhood (MCN) experiments have been used to assess the fitness effect of new mutations in heterozygous form. However, because MCN populations harbor substantial standing genetic variance, estimates of mutational variance have not typically been available from such experiments. Here we employ a modification of the animal model to analyze data from 22 generations of Drosophila serrata bred in an MCN design. Mutational heritability, measured for eight cuticular hydrocarbons, 10 wing-shape traits, and wing size in this outbred genetic background, ranged from 0.0006 to 0.006 (with one exception), a similar range to that reported from studies employing inbred lines. Simultaneously partitioning the additive and mutational variance in the same outbred population allowed us to quantitatively test the ability of mutation-selection balance models to explain the observed levels of additive and mutational genetic variance. The Gaussian allelic approximation and house-of-cards models, which assume real stabilizing selection on single traits, both overestimated the genetic variance maintained at equilibrium, but the house-of-cards model was a closer fit to the data. This analytical approach has the potential to be broadly applied, expanding our understanding of the dynamics of genetic variance in natural populations.

摘要

新突变如何促进遗传变异是生物学中的一个关键问题。尽管一个等位基因的进化命运在很大程度上由其杂合效应决定,但大多数对突变方差和突变效应的估计都来自高度近交系,在这些近交系中,新突变以纯合形式存在。为了克服这一局限性,中产阶级邻域(MCN)实验已被用于评估杂合形式新突变的适合度效应。然而,由于MCN群体存在大量的遗传方差,通常无法从这类实验中获得突变方差的估计值。在此,我们采用动物模型的一种改进方法来分析以MCN设计培育22代的锯缘果蝇的数据。在这种远交遗传背景下,对八种表皮碳氢化合物、十种翅形性状和翅大小进行测量得到的突变遗传力范围为0.0006至0.006(有一个例外),与采用近交系的研究报告的范围相似。同时在同一个远交群体中划分加性方差和突变方差,使我们能够定量测试突变 - 选择平衡模型解释观察到的加性和突变遗传方差水平的能力。假设对单一性状存在实际稳定选择的高斯等位基因近似模型和纸牌屋模型,都高估了平衡时维持的遗传方差,但纸牌屋模型与数据的拟合度更高。这种分析方法有可能得到广泛应用,扩展我们对自然种群遗传方差动态的理解。

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