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利用单分子荧光能量转移光谱技术在膜模拟环境中定量研究毫秒级蛋白质折叠动力学。

Quantification of Millisecond Protein-Folding Dynamics in Membrane-Mimetic Environments by Single-Molecule Förster Resonance Energy Transfer Spectroscopy.

机构信息

B CUBE-Center for Molecular Bioengineering, Technische Universität Dresden , Arnoldstr. 18, 01307 Dresden, Germany.

Molecular Biophysics, University of Kaiserslautern , Erwin-Schrödinger-Str. 13, 67663 Kaiserslautern, Germany.

出版信息

Anal Chem. 2015 Nov 17;87(22):11224-32. doi: 10.1021/acs.analchem.5b03207. Epub 2015 Oct 23.

Abstract

An increasing number of membrane proteins in different membrane-mimetic systems have become accessible to reversible unfolding experiments monitored by well-established ensemble techniques. However, only little information is available about kinetic processes during membrane-protein folding, mainly because of experimental challenges and a lack of methods suitable for observing highly dynamic membrane proteins. Here, we present single-molecule Förster resonance energy transfer (smFRET) confocal spectroscopy as a powerful tool in kinetic studies of membrane-protein folding in membrane-mimetic environments. We have developed a rigorous workflow demonstrating how to identify and quantify such dynamic processes using a set of qualitative, semiquantitative, and quantitative analytical tools. Using this workflow, we analyzed urea-induced folding and unfolding experiments on the α-helical membrane protein Mistic in the presence of the zwitterionic detergent n-dodecylphosphocholine (DPC). We identified two-state interconversion dynamics on the millisecond time scale of a protein folding into and out of detergent micelles. Our results demonstrate that smFRET is a promising tool for probing the chemical physics of membrane-protein structure and dynamics in the complex and anisotropic environment of a hydrophilic/hydrophobic interface, providing insights into protein interconversion dynamics without the need and challenges of synchronization.

摘要

越来越多的膜蛋白在不同的膜模拟系统中已经可以通过成熟的整体技术进行可逆展开实验来研究。然而,关于膜蛋白折叠过程中的动力学过程的信息却很少,这主要是由于实验上的挑战和缺乏适合观察高度动态膜蛋白的方法。在这里,我们提出了单分子荧光共振能量转移(smFRET)共焦光谱学作为在膜模拟环境中研究膜蛋白折叠的动力学的有力工具。我们已经开发了一个严格的工作流程,展示了如何使用一组定性、半定量和定量分析工具来识别和量化这些动态过程。使用这个工作流程,我们分析了在两性离子去污剂 n-十二烷基磷酸胆碱(DPC)存在下,α-螺旋膜蛋白 Mistic 的脲诱导折叠和展开实验。我们在毫秒时间尺度上鉴定了蛋白质折叠成和离开去污胶束的两态互变动力学。我们的结果表明,smFRET 是一种很有前途的工具,可以探测亲水/疏水界面复杂各向异性环境中膜蛋白结构和动力学的化学物理学,提供对蛋白质互变动力学的深入了解,而无需同步的需求和挑战。

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