Sponholz Christoph, Kramer Marcel, Schöneweck Franziska, Menzel Uwe, Inanloo Rahatloo Kolsoum, Giamarellos-Bourboulis Evangelos J, Papavassileiou Vassileios, Lymberopoulou Korina, Pavlaki Maria, Koutelidakis Ioannis, Perdios Ioannis, Scherag André, Bauer Michael, Platzer Matthias, Huse Klaus
Integrated Research and Treatment Center, Center for Sepsis Control and Care (CSCC), Jena University Hospital, Jena, Germany.
Genome Analysis, Leibniz Institute for Age Research-Fritz Lipmann Institute, Jena, Germany.
Eur J Hum Genet. 2016 Jul;24(7):1041-8. doi: 10.1038/ejhg.2015.231. Epub 2015 Oct 28.
Sepsis is the systemic inflammatory host response to infection. Cystathionine beta-synthase (CBS)-dependent homocysteine (Hcy) pathway was demonstrated to affect disease severity and mortality in patients with severe sepsis/septic shock. Independent studies identified a single-nucleotide polymorphism (SNP, rs6586282, hg19 chr21:g.44478497C>T) in intron 14 of the CBS-coding gene (CBS) associated with Hcy plasma levels. We aimed to describe the association of this SNP and variants of a splice donor-affecting variable-number tandem repeat (VNTR, NG_008938.1:g.22763_22793[16_22]) 243 bp downstream of rs6586282 with severe human sepsis. We analyzed the VNTR structure and genotyped variants of rs6586282 and a neighboring SNP (rs34758144, hg19 chr21:g.44478582G>A) in two case-control studies including patients with severe sepsis/septic shock from Germany (n=168) and Greece (n=237). In both studies, we consistently observed an association of CBS VNTR alleles with sepsis susceptibility. Risk linearly increased with number of tandem repeats (per allele odds ratio in the adjusted analysis 1.34; 95% confidence interval (CI)=1.17-1.55; P<0.001). Association had also been shown for rs34758144 whose risk allele is in linkage disequilibrium with one long VNTR allele (19 repeat). In contrast, we observed no evidence for an effect on 28-day survival in patients with severe sepsis/septic shock (per allele hazard ratio in the adjusted analysis for VNTR 1.10; 95% CI=0.95-1.28; P=0.20). In a minigene approach, we demonstrated alternative splicing in distinct VNTR alleles, which, however, was independent of the number of tandem units. In conclusion, there is no ordinary conjunction between human CBS and severe sepsis/septic shock, but CBS genotypes are involved in disease susceptibility.
脓毒症是机体对感染的全身性炎症反应。已证实,胱硫醚β-合酶(CBS)依赖性同型半胱氨酸(Hcy)途径会影响严重脓毒症/脓毒性休克患者的疾病严重程度和死亡率。独立研究发现,CBS编码基因(CBS)第14内含子中的一个单核苷酸多态性(SNP,rs6586282,hg19 chr21:g.44478497C>T)与血浆Hcy水平相关。我们旨在描述该SNP以及rs6586282下游243bp处一个影响剪接供体的可变数目串联重复序列(VNTR,NG_008938.1:g.22763_22793[16_22])的变异与严重脓毒症的关联。我们在两项病例对照研究中分析了VNTR结构,并对rs6586282及其邻近SNP(rs34758144,hg19 chr21:g.44478582G>A)进行了基因分型,这两项研究的对象分别是来自德国(n=168)和希腊(n=237)的严重脓毒症/脓毒性休克患者。在两项研究中,我们均一致观察到CBS VNTR等位基因与脓毒症易感性之间存在关联。风险随着串联重复数目的增加呈线性上升(校正分析中每个等位基因的比值比为1.34;95%置信区间(CI)=1.17 - 1.55;P<0.001)。rs34758144也显示出关联,其风险等位基因与一个长VNTR等位基因(19次重复)处于连锁不平衡状态。相比之下,我们未观察到对严重脓毒症/脓毒性休克患者28天生存率有影响的证据(校正分析中VNTR每个等位基因的风险比为1.10;95% CI=0.95 - 1.28;P=0.20)。在一个小基因实验中,我们证明了不同VNTR等位基因存在可变剪接,但这与串联单元的数量无关。总之,人类CBS与严重脓毒症/脓毒性休克之间不存在通常的关联,但CBS基因型与疾病易感性有关。