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使用具有各向异性正则化的多模态非刚性配准对EPI数据进行失真校正。

Distortion correction of EPI data using multimodal nonrigid registration with an anisotropic regularization.

作者信息

Glodeck Daniel, Hesser Jürgen, Zheng Lei

机构信息

Experimental Radiation Oncology, Department of Radiation Oncology, University Medical Center Mannheim, Heidelberg University, Germany.

出版信息

Magn Reson Imaging. 2016 Feb;34(2):127-36. doi: 10.1016/j.mri.2015.10.032. Epub 2015 Nov 3.

DOI:10.1016/j.mri.2015.10.032
PMID:26545733
Abstract

In this paper, a novel strategy for correcting both geometric and image intensity distortions of echo-planar imaging (EPI) MRI data is presented. To deal with small local distortions caused by rapid changes of the magnetic field, an improved multimodal registration framework using normalized mutual information (NMI) in combination with a multi-scale technique is presented to estimate a dense displacement field. To ensure the robustness of this high dimensional ill-posed inverse problem, a novel anisotropic regularization functional is used. In order to quantify geometric distortions, a new quality measure, called standardized contour distance (SCD), is introduced. It uses the outer structure shape (OSS) information as basis for the evaluation. The new registration method was evaluated with one monomodal phantom data set and two multimodal human brain data sets (BrainSuite trainings data, SPM Subject data). By comparing with recent and efficient techniques of the state of the art, in the monomodal case, the new approach achieves results comparable to the sum of squared differences as data term. In the multimodal cases, our new registration strategy improves the mean of the SCD from 0.96±0.11 to 0.60±0.13 in case of the SPM Subject data and from 0.92±0.07 to 0.78±0.11 in case of the BrainSuite trainings data.

摘要

本文提出了一种校正回波平面成像(EPI)磁共振成像(MRI)数据几何和图像强度失真的新策略。为处理由磁场快速变化引起的小局部失真,提出了一种改进的多模态配准框架,该框架使用归一化互信息(NMI)并结合多尺度技术来估计密集位移场。为确保这个高维不适定逆问题的鲁棒性,使用了一种新型各向异性正则化泛函。为量化几何失真,引入了一种称为标准化轮廓距离(SCD)的新质量度量。它将外部结构形状(OSS)信息用作评估基础。使用一个单模态体模数据集和两个多模态人脑数据集(BrainSuite训练数据、SPM受试者数据)对新的配准方法进行了评估。通过与最新的高效技术进行比较,在单模态情况下,新方法获得的结果与将平方差之和用作数据项时相当。在多模态情况下,对于SPM受试者数据,我们的新配准策略将SCD的均值从0.96±0.11提高到0.60±0.13;对于BrainSuite训练数据,将SCD的均值从0.92±0.07提高到0.78±0.11。

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Magn Reson Imaging. 2016 Feb;34(2):127-36. doi: 10.1016/j.mri.2015.10.032. Epub 2015 Nov 3.
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PROPELLER EPI: an MRI technique suitable for diffusion tensor imaging at high field strength with reduced geometric distortions.螺旋桨回波平面成像:一种适用于高场强下扩散张量成像且几何畸变减小的磁共振成像技术。
Magn Reson Med. 2005 Nov;54(5):1232-40. doi: 10.1002/mrm.20677.

引用本文的文献

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Med Phys. 2022 Dec;49(12):7531-7544. doi: 10.1002/mp.15881. Epub 2022 Aug 8.
2
Quantitative Assessment of the Impact of Geometric Distortions and Their Correction on fMRI Data Analyses.几何畸变及其校正对功能磁共振成像(fMRI)数据分析影响的定量评估
Front Neurosci. 2021 Mar 9;15:642808. doi: 10.3389/fnins.2021.642808. eCollection 2021.
3
Efficacy of a Nonrigid Image-registration Method in Comparison to Readout-segmented Echo-planar Imaging for Correcting Distortion in Diffusion-weighted Imaging.
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Magn Reson Med Sci. 2021 Jun 1;20(2):216-221. doi: 10.2463/mrms.tn.2020-0014. Epub 2020 Jul 8.
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Alternative splicing controls teneurin-latrophilin interaction and synapse specificity by a shape-shifting mechanism.可变剪接通过一种构象变化机制控制 teneurin- latrophilin 的相互作用和突触特异性。
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