Department of Chemical and Biomolecular Engineering, University of Notre Dame, 182 Fitzpatrick Hall, Notre Dame, Indiana 46556-5637, United States.
J Chem Theory Comput. 2011 Feb 8;7(2):269-79. doi: 10.1021/ct100615j. Epub 2011 Jan 10.
Acceptance rules for reaction ensemble Monte Carlo (RxMC) simulations containing classically modeled atomistic degrees of freedom are derived for complex molecular systems where insertions and deletions are achieved gradually by utilizing the continuous fractional component (CFC) method. A self-consistent manner in which to utilize statistical mechanical data contained in ideal gas free energy parameters during RxMC moves is presented. The method is tested by applying it to two previously studied systems containing intramolecular degrees of freedom: the propene metathesis reaction and methyl-tert-butyl-ether (MTBE) synthesis. Quantitative agreement is found between the current results and those of Keil et al. (J. Chem. Phys. 2005, 122, 164705) for the propene metathesis reaction. Differences are observed between the equilibrium concentrations of the present study and those of Lísal et al. (AIChE J. 2000, 46, 866-875) for the MTBE reaction. It is shown that most of this difference can be attributed to an incorrect formulation of the Monte Carlo acceptance rule. Efficiency gains using CFC MC as opposed to single stage molecule insertions are presented.
接受规则为反应系综 Monte Carlo (RxMC) 模拟含有经典模型原子自由度的复杂分子系统中,通过利用连续分数分量 (CFC) 方法逐步实现插入和删除。提出了一种在 RxMC 移动过程中利用理想气体自由能参数中包含的统计力学数据的自洽方法。该方法通过将其应用于两个包含分子内自由度的先前研究的系统来进行测试:丙烯复分解反应和甲基叔丁基醚 (MTBE) 合成。当前的结果与 Keil 等人的结果(J. Chem. Phys. 2005, 122, 164705)对于丙烯复分解反应定量一致。对于 MTBE 反应,本研究的平衡浓度与 Lísal 等人的结果(AIChE J. 2000, 46, 866-875)之间存在差异。结果表明,这种差异的大部分可以归因于 Monte Carlo 接受规则的不正确制定。提出了使用 CFC MC 相对于单阶段分子插入的效率提高。