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气相条件下钙(Ca(2+))与尿嘧啶硒衍生物的相互作用。

Gas-Phase Interaction of Calcium (Ca(2+)) with Seleno Derivatives of Uracil.

机构信息

Departamento de Química C-9, Facultad de Ciencias, Universidad Autónoma de Madrid, Cantoblanco, 28049-Madrid, Spain, and Department of Chemistry, Dalhousie University, Halifax, Nova Scotia, B3H 4J3 Canada.

出版信息

J Chem Theory Comput. 2008 Jun;4(6):1002-11. doi: 10.1021/ct800017j.

Abstract

The structures and relative stabilities of the complexes between Ca(2+) and 2-selenouracil, 4-selenouracil, and 2,4-diselenouracil have been investigated through the use of B3LYP/6-311++G(3df,2p)//B3LYP/6-31+G(d,p) density functional theory (DFT) calculations. In those systems where both types of basic centers, a carbonyl or a selenocarbonyl group, are present, Ca(2+) association with the oxygen is favored. For 2,4-diselenouracil the nitrogen atom at position 3 is the most basic site toward Ca(2+) attachment followed by heteroatoms attached to positions 4 and 2. Although the enolic and selenol forms of selenouracils should not be observed in the gas phase, the corresponding Ca(2+) complexes are the most stable ones. More importantly, all the activation barriers associated with the corresponding tautomeric processes are lower than the entrance channel, and therefore not only these complexes should be observed but also they should be the dominant species in the gas phase. Also, Ca(2+) association has a clear catalytic effect on these tautomerization processes, whose activation barriers decrease between 10 and 15 kcal mol(-1).

摘要

采用 B3LYP/6-311++G(3df,2p)//B3LYP/6-31+G(d,p)密度泛函理论(DFT)计算,研究了 Ca(2+)与 2-硒尿嘧啶、4-硒尿嘧啶和 2,4-二硒尿嘧啶复合物的结构和相对稳定性。在那些存在两种碱性中心(羰基或硒羰基)的体系中,Ca(2+)与氧的结合更有利。对于 2,4-二硒尿嘧啶,位置 3 的氮原子是与 Ca(2+)结合的最碱性位点,其次是与位置 4 和 2 相连的杂原子。尽管硒尿嘧啶的烯醇式和硒醇式形式在气相中不应观察到,但相应的 Ca(2+)配合物是最稳定的。更重要的是,与相应互变异构过程相关的所有活化能垒都低于入口通道,因此不仅应该观察到这些配合物,而且它们应该是气相中的主要物种。此外,Ca(2+)的结合对这些互变异构过程具有明显的催化作用,其活化能垒降低了 10-15 kcal/mol。

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