Sato Daisuke, Takebe Satsuki, Kurobe Atsushi, Ohtomo Hideaki, Fujiwara Kazuo, Ikeguchi Masamichi
Department of Bioinformatics, Soka University , 1-236 Tangi-machi, Hachioji, Tokyo 192-8577, Japan.
Biochemistry. 2016 Jan 26;55(3):482-8. doi: 10.1021/acs.biochem.5b01197. Epub 2016 Jan 8.
Escherichia coli non-heme-binding ferritin A (EcFtnA) is a spherical cagelike protein that is composed of 24 identical subunits. EcFtnA dissociates into 2-mers under acidic conditions and can reassemble into the native structure when the pH is increased. To understand how electrostatic interactions influence the assembly reaction, the dependence of the process on ionic strength and pH was investigated. The assembly reaction was initiated by stopped-flow mixing of the acid-dissociated EcFtnA solution and high-pH buffer solutions and monitored by time-resolved small-angle X-ray scattering. The rate of assembly increased with increasing ionic strength and decreased with increasing pH from 6 to 8. These dependences were thought to originate from repulsion between assembly units (2-mer in the case of EcFtnA) with the same net charge sign; therefore, to test this assumption, mutants with different net charges (net-charge mutants) were prepared. In buffers with a low ionic strength, the rate of assembly increased with a decreasing net charge. Thus, repulsion between the assembly unit net charges was demonstrated to be an important factor determining the rate of assembly. However, the difference in the assembly rate among net-charge mutants was not significant in buffers with an ionic strength of >0.1. Notably, under such high-ionic strength conditions, the assembly rate increased with an increasing ionic strength, suggesting that local electrostatic interactions are also responsible for the ionic strength dependence of the rate of assembly and are repulsive on average.
大肠杆菌非血红素结合铁蛋白A(EcFtnA)是一种球形笼状蛋白,由24个相同的亚基组成。EcFtnA在酸性条件下会解离成二聚体,当pH值升高时可重新组装成天然结构。为了了解静电相互作用如何影响组装反应,研究了该过程对离子强度和pH值的依赖性。通过将酸解离的EcFtnA溶液与高pH缓冲溶液进行停流混合引发组装反应,并通过时间分辨小角X射线散射进行监测。组装速率随离子强度的增加而增加,随pH值从6增加到8而降低。这些依赖性被认为源于具有相同净电荷符号的组装单元(EcFtnA情况下为二聚体)之间的排斥;因此,为了验证这一假设,制备了具有不同净电荷的突变体(净电荷突变体)。在低离子强度的缓冲液中,组装速率随净电荷的减少而增加。因此,组装单元净电荷之间的排斥被证明是决定组装速率的一个重要因素。然而,在离子强度>0.1的缓冲液中,净电荷突变体之间的组装速率差异并不显著。值得注意的是,在这种高离子强度条件下,组装速率随离子强度的增加而增加,这表明局部静电相互作用也与组装速率对离子强度的依赖性有关,并且平均而言是排斥性的。