Lu Jiongming, Marygold Steven J, Gharib Walid H, Suter Beat
a Institute of Cell Biology; University of Bern ; Bern , Switzerland.
b FlyBase; Department of Genetics; University of Cambridge ; Cambridge , UK.
Fly (Austin). 2015;9(2):53-61. doi: 10.1080/19336934.2015.1101196.
Aminoacyl-tRNA synthetases (aaRSs) ligate amino acids to their cognate tRNAs, allowing them to decode the triplet code during translation. Through different mechanisms aaRSs also perform several non-canonical functions in transcription, translation, apoptosis, angiogenesis and inflammation. Drosophila has become a preferred system to model human diseases caused by mutations in aaRS genes, to dissect effects of reduced translation or non-canonical activities, and to study aminoacylation and translational fidelity. However, the lack of a systematic annotation of this gene family has hampered such studies. Here, we report the identification of the entire set of aaRS genes in the fly genome and we predict their roles based on experimental evidence and/or orthology. Further, we propose a new, systematic and logical nomenclature for aaRSs. We also review the research conducted on Drosophila aaRSs to date. Together, our work provides the foundation for further research in the fly aaRS field.
氨酰-tRNA合成酶(aaRSs)将氨基酸连接到其对应的tRNA上,使其能够在翻译过程中解码三联体密码。通过不同机制,aaRSs还在转录、翻译、细胞凋亡、血管生成和炎症中发挥多种非经典功能。果蝇已成为一种理想的系统,用于模拟由aaRS基因突变引起的人类疾病,剖析翻译减少或非经典活性的影响,并研究氨酰化和翻译保真度。然而,该基因家族缺乏系统注释阻碍了此类研究。在这里,我们报告了果蝇基因组中整套aaRS基因的鉴定,并根据实验证据和/或直系同源性预测了它们的作用。此外,我们为aaRSs提出了一种新的、系统且合理的命名法。我们还回顾了迄今为止对果蝇aaRSs进行的研究。总之,我们的工作为果蝇aaRS领域的进一步研究奠定了基础。