Suppr超能文献

使用结合计算机模拟模型与化学/体外试验的决策树综合测试策略预测皮肤致敏性。

Predicting skin sensitisation using a decision tree integrated testing strategy with an in silico model and in chemico/in vitro assays.

作者信息

Macmillan Donna S, Canipa Steven J, Chilton Martyn L, Williams Richard V, Barber Christopher G

机构信息

Lhasa Limited, Granary Wharf House, 2 Canal Wharf, Leeds, LS11 5PS, UK.

Lhasa Limited, Granary Wharf House, 2 Canal Wharf, Leeds, LS11 5PS, UK.

出版信息

Regul Toxicol Pharmacol. 2016 Apr;76:30-8. doi: 10.1016/j.yrtph.2016.01.009. Epub 2016 Jan 18.

Abstract

There is a pressing need for non-animal methods to predict skin sensitisation potential and a number of in chemico and in vitro assays have been designed with this in mind. However, some compounds can fall outside the applicability domain of these in chemico/in vitro assays and may not be predicted accurately. Rule-based in silico models such as Derek Nexus are expert-derived from animal and/or human data and the mechanism-based alert domain can take a number of factors into account (e.g. abiotic/biotic activation). Therefore, Derek Nexus may be able to predict for compounds outside the applicability domain of in chemico/in vitro assays. To this end, an integrated testing strategy (ITS) decision tree using Derek Nexus and a maximum of two assays (from DPRA, KeratinoSens, LuSens, h-CLAT and U-SENS) was developed. Generally, the decision tree improved upon other ITS evaluated in this study with positive and negative predictivity calculated as 86% and 81%, respectively. Our results demonstrate that an ITS using an in silico model such as Derek Nexus with a maximum of two in chemico/in vitro assays can predict the sensitising potential of a number of chemicals, including those outside the applicability domain of existing non-animal assays.

摘要

迫切需要非动物方法来预测皮肤致敏潜力,因此设计了一些化学和体外试验。然而,一些化合物可能超出这些化学/体外试验的适用范围,可能无法准确预测。基于规则的计算机模型,如Derek Nexus,是从动物和/或人类数据中专家推导出来的,基于机制的警报域可以考虑多种因素(如非生物/生物激活)。因此,Derek Nexus可能能够预测超出化学/体外试验适用范围的化合物。为此,开发了一种使用Derek Nexus和最多两种试验(来自DPRA、KeratinoSens、LuSens、h-CLAT和U-SENS)的综合测试策略(ITS)决策树。一般来说,该决策树比本研究中评估的其他ITS有所改进,阳性和阴性预测率分别计算为86%和81%。我们的结果表明,使用如Derek Nexus这样的计算机模型和最多两种化学/体外试验的ITS可以预测许多化学物质的致敏潜力,包括那些超出现有非动物试验适用范围的化学物质。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验