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深入了解组氨酸在结核分枝杆菌核糖核酸酶P蛋白组分的RNR基序催化中的作用。

Insight into the role of histidine in RNR motif of protein component of RNase P of M. tuberculosis in catalysis.

作者信息

Singh Alla, Ramteke Anup K, Afroz Tariq, Batra Janendra K

机构信息

Immunochemistry Laboratory, National Institute of Immunology, Aruna Asaf Ali Marg, New Delhi, India.

出版信息

IUBMB Life. 2016 Mar;68(3):178-89. doi: 10.1002/iub.1472. Epub 2016 Jan 24.

Abstract

RNase P, a ribonucleoprotein endoribonuclease, is involved in the 5' end processing of pre-tRNAs, with its RNA component being the catalytic subunit. It is an essential enzyme. All bacterial RNase Ps have one RNA and one protein component. A conserved RNR motif in bacterial RNase P protein components is involved in their interaction with the RNA component. In this work, we have reconstituted the RNase P of M. tuberculosis in vitro and investigated the role of a histidine in the RNR motif in its catalysis. We expressed the protein and RNA components of mycobacterial RNase P in E. coli, purified them, and reconstituted the holoenzyme in vitro. The histidine in RNR motif was mutated to alanine and asparagine by site-directed mutagenesis. The RNA component alone showed activity on pre-tRNA(ala) substrate at high magnesium concentrations. The RNA and protein components associated together to manifest catalytic activity at low magnesium concentrations. The histidine 67 in the RNR motif of M. tuberculosis RNase P protein component was found to be important for the catalytic activity and stability of the enzyme. Generally, the RNase P of M. tuberculosis functions like other bacterial enzymes. The histidine in the RNR motif of M. tuberculosis appears to be able to substitute optimally for asparagine found in the majority of the protein components of other bacterial RNase P enzymes.

摘要

核糖核酸酶P是一种核糖核蛋白内切核糖核酸酶,参与前体tRNA的5'端加工,其RNA组分是催化亚基。它是一种必需酶。所有细菌核糖核酸酶P都有一个RNA和一个蛋白质组分。细菌核糖核酸酶P蛋白质组分中的保守RNR基序参与它们与RNA组分的相互作用。在这项工作中,我们在体外重构了结核分枝杆菌的核糖核酸酶P,并研究了RNR基序中的一个组氨酸在其催化作用中的作用。我们在大肠杆菌中表达了分枝杆菌核糖核酸酶P的蛋白质和RNA组分,对它们进行了纯化,并在体外重构了全酶。通过定点诱变将RNR基序中的组氨酸突变为丙氨酸和天冬酰胺。单独的RNA组分在高镁浓度下对前体tRNA(ala)底物表现出活性。RNA和蛋白质组分在低镁浓度下结合在一起表现出催化活性。发现结核分枝杆菌核糖核酸酶P蛋白质组分的RNR基序中的组氨酸67对该酶的催化活性和稳定性很重要。一般来说,结核分枝杆菌的核糖核酸酶P的功能与其他细菌酶类似。结核分枝杆菌RNR基序中的组氨酸似乎能够最佳替代其他细菌核糖核酸酶P酶的大多数蛋白质组分中发现的天冬酰胺。

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