Cerny Katheryn L, Ribeiro Rosanne A C, Jeoung Myoungkun, Ko CheMyong, Bridges Phillip J
Department of Animal and Food Sciences, University of Kentucky, Lexington, KY 40546, United States of America.
Department of Clinical Sciences, University of Kentucky, Lexington, KY 40536, United States of America.
PLoS One. 2016 Jan 25;11(1):e0147685. doi: 10.1371/journal.pone.0147685. eCollection 2016.
Estrogen receptor-α (ESR1) is an important transcriptional regulator in the mammalian oviduct, however ESR1-dependent regulation of the transcriptome of this organ is not well defined, especially at the genomic level. The objective of this study was therefore to investigate estradiol- and ESR1-dependent regulation of the transcriptome of the oviduct using transgenic mice, both with (ESR1KO) and without (wild-type, WT) a global deletion of ESR1. Oviducts were collected from ESR1KO and WT littermates at 23 days of age, or ESR1KO and WT mice were treated with 5 IU PMSG to stimulate follicular development and the production of ovarian estradiol, and the oviducts collected 48 h later. RNA extracted from whole oviducts was hybridized to Affymetrix Genechip Mouse Genome 430-2.0 arrays (n = 3 arrays per genotype and treatment) or reverse transcribed to cDNA for analysis of the expression of selected mRNAs by real-time PCR. Following microarray analysis, a statistical two-way ANOVA and pairwise comparison (LSD test) revealed 2428 differentially expressed transcripts (DEG's, P < 0.01). Genotype affected the expression of 2215 genes, treatment (PMSG) affected the expression of 465 genes, and genotype x treatment affected the expression of 438 genes. With the goal of determining estradiol/ESR1-regulated function, gene ontology (GO) and bioinformatic pathway analyses were performed on DEG's in the oviducts of PMSG-treated ESR1KO versus PMSG-treated WT mice. Significantly enriched GO molecular function categories included binding and catalytic activity. Significantly enriched GO cellular component categories indicated the extracellular region. Significantly enriched GO biological process categories involved a single organism, modulation of a measurable attribute and developmental processes. Bioinformatic analysis revealed ESR1-regulation of the immune response within the oviduct as the primary canonical pathway. In summary, a transcriptomal profile of estradiol- and ESR1-regulated gene expression and related bioinformatic analysis is presented to increase our understanding of how estradiol/ESR1 affects function of the oviduct, and to identify genes that may be proven as important regulators of fertility in the future.
雌激素受体-α(ESR1)是哺乳动物输卵管中的一种重要转录调节因子,然而ESR1对该器官转录组的依赖性调节尚未明确界定,尤其是在基因组水平上。因此,本研究的目的是使用转基因小鼠,研究雌二醇和ESR1对输卵管转录组的依赖性调节,这些小鼠既有ESR1基因的整体缺失(ESR1KO),也有未缺失的(野生型,WT)。在23日龄时从ESR1KO和WT同窝小鼠中收集输卵管,或者用5国际单位孕马血清促性腺激素(PMSG)处理ESR1KO和WT小鼠以刺激卵泡发育和卵巢雌二醇的产生,并在48小时后收集输卵管。从整个输卵管中提取的RNA与Affymetrix基因芯片小鼠基因组430 - 2.0阵列杂交(每种基因型和处理n = 3个阵列),或反转录为cDNA,通过实时PCR分析选定mRNA的表达。经过微阵列分析,统计双向方差分析和成对比较(LSD检验)显示有2428个差异表达转录本(DEG,P < 0.01)。基因型影响2215个基因表达,处理(PMSG)影响465个基因表达,基因型×处理影响438个基因表达。为了确定雌二醇/ESR1调节的功能,对PMSG处理的ESR1KO小鼠与PMSG处理的WT小鼠输卵管中的DEG进行了基因本体(GO)和生物信息通路分析。显著富集的GO分子功能类别包括结合和催化活性。显著富集的GO细胞成分类别表明是细胞外区域。显著富集的GO生物学过程类别涉及单个生物体、可测量属性的调节和发育过程。生物信息分析显示,输卵管内免疫反应的ESR1调节是主要的经典通路。总之,本文呈现了雌二醇和ESR1调节的基因表达的转录组概况以及相关生物信息分析,以增进我们对雌二醇/ESR1如何影响输卵管功能的理解,并鉴定未来可能被证明是生育重要调节因子的基因。