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基于RADseq标记的刺盖鱼属神仙鱼的物种形成速度和模式。

Tempo and mode of speciation in Holacanthus angelfishes based on RADseq markers.

作者信息

Tariel Juliette, Longo Gary C, Bernardi Giacomo

机构信息

Department of Ecology and Evolutionary Biology, University of California Santa Cruz, Santa Cruz, CA 95060, USA; Ecole Normale Supérieure de Lyon, 15 parvis René Descartes, 69342 Lyon, France.

Department of Ecology and Evolutionary Biology, University of California Santa Cruz, Santa Cruz, CA 95060, USA.

出版信息

Mol Phylogenet Evol. 2016 May;98:84-8. doi: 10.1016/j.ympev.2016.01.010. Epub 2016 Feb 11.

Abstract

In this study we estimated the timing of speciation events in a group of angelfishes using 1186 RADseq markers corresponding to 94,880 base pairs. The genus Holacanthus comprises seven species, including two clades of Panama trans-Isthmian geminates, which diverged approximately 3-3.5Mya. These clades diversified within the Tropical Eastern Pacific (TEP, three species) and Tropical Western Atlantic (TWA, two species) which our data suggest to have occurred within the past 1.5My in both ocean basins, but may have proceeded via different mechanisms. In the TEP, speciation is likely to have followed a peripatric pathway, while in the TWA, sister species are currently partially sympatric, thus raising the possibility of sympatric speciation. This study highlights the use of RADseq markers for estimating both divergence times and modes of speciation at a 1-3My timescale.

摘要

在本研究中,我们使用对应于94,880个碱基对的1186个RADseq标记估计了一组神仙鱼物种形成事件的时间。刺盖鱼属包含七个物种,包括两个巴拿马地峡两侧成对的分支,它们大约在300 - 350万年前分化。这些分支在热带东太平洋(TEP,三种)和热带西大西洋(TWA,两种)内多样化,我们的数据表明这两个海洋盆地内的分化发生在过去150万年之内,但可能通过不同机制进行。在TEP,物种形成可能遵循边缘隔离途径,而在TWA,姐妹物种目前部分同域分布,因此增加了同域物种形成的可能性。本研究强调了RADseq标记在100 - 300万年时间尺度上估计分化时间和物种形成模式方面的应用。

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