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非靶向代谢组学分析揭示了ETHE1介导的氧化还原状态破坏与代谢调节改变之间的联系。

Untargeted Metabolomics Analysis Reveals a Link between ETHE1-Mediated Disruptive Redox State and Altered Metabolic Regulation.

作者信息

Sahebekhtiari Navid, Nielsen Camilla Bak, Johannsen Mogens, Palmfeldt Johan

机构信息

Research Unit for Molecular Medicine, Department of Clinical Medicine, Aarhus University and Aarhus University Hospital , Palle Juul-Jensens Boulevard 99, 8200 Aarhus N, Denmark.

Section for Forensic Chemistry, Department of Forensic Medicine, Aarhus University , Palle Juul-Jensens Boulevard 99, 8200 Aarhus N, Denmark.

出版信息

J Proteome Res. 2016 May 6;15(5):1630-8. doi: 10.1021/acs.jproteome.6b00100. Epub 2016 Apr 13.

Abstract

Defects in the gene encoding the persulfide dioxygenase ETHE1 are known to cause the severe inherited metabolic disorder ethylmalonic encephalopathy (EE). In spite of known clinical characteristics, the molecular mechanisms underlying the ETHE1 deficiency are still obscure. Herein, to further analyze the molecular phenotype of the disease, we applied an untargeted metabolomics approach on cultivated fibroblasts of EE patients for pinpointing alterations in metabolite levels. Metabolites, as direct signatures of biochemical functions, can decipher biochemical pathways involved in the cellular phenotype of patient cells. Using liquid chromatography-mass spectrometry-based untargeted metabolomics, we identified 18 metabolites that have altered levels in fibroblasts from EE patients. Our data demonstrate disrupted redox state in EE patient cells, which is reflected by significantly decreased level of reduced glutathione. Furthermore, the down-regulation of several intermediate metabolites such as the redox cofactors NAD(+) and NADH as well as Krebs cycle intermediates revealed clear alteration in metabolic regulation. Pantothenic acid and several amino acids exhibited decreased levels, whereas the β-citrylglutamate with a putative role in brain development had an increased level in the EE patient cells. These observations indicate the severe impact of ETHE1 deficiency on cellular physiology and redox state, meanwhile suggesting targets for experimental studies on novel treatment options for the devastating metabolic disorder.

摘要

已知编码过硫化物双加氧酶ETHE1的基因缺陷会导致严重的遗传性代谢紊乱——乙基丙二酸脑病(EE)。尽管EE有已知的临床特征,但其潜在的分子机制仍不清楚。在此,为了进一步分析该疾病的分子表型,我们对EE患者的培养成纤维细胞应用了非靶向代谢组学方法,以确定代谢物水平的变化。代谢物作为生化功能的直接标志,可以解读与患者细胞的细胞表型相关的生化途径。使用基于液相色谱 - 质谱联用的非靶向代谢组学,我们鉴定出18种在EE患者成纤维细胞中水平发生改变的代谢物。我们的数据表明EE患者细胞中的氧化还原状态受到破坏,这表现为还原型谷胱甘肽水平显著降低。此外,几种中间代谢物如氧化还原辅因子NAD(+)和NADH以及三羧酸循环中间产物的下调揭示了代谢调节的明显改变。泛酸和几种氨基酸水平降低,而在脑发育中可能起作用的β - 柠檬酰谷氨酸在EE患者细胞中的水平升高。这些观察结果表明ETHE1缺陷对细胞生理和氧化还原状态有严重影响,同时为这种毁灭性代谢紊乱的新型治疗方案的实验研究提供了靶点。

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