Departament de Física Fonamental, Universitat de Barcelona, 08028 Barcelona, Spain; email:
CIBER-BBN de Bioingeniería, Biomateriales y Nanomedicina, Instituto de Salud Carlos III, 28029 Madrid, Spain.
Annu Rev Biophys. 2016 Jul 5;45:65-84. doi: 10.1146/annurev-biophys-062215-011158. Epub 2016 Apr 27.
We review the current knowledge on the use of single-molecule force spectroscopy techniques to extrapolate the elastic properties of nucleic acids. We emphasize the lesser-known elastic properties of single-stranded DNA. We discuss the importance of accurately determining the elastic response in pulling experiments, and we review the simplest models used to rationalize the experimental data as well as the experimental approaches used to pull single-stranded DNA. Applications used to investigate DNA conformational transitions and secondary structure formation are also highlighted. Finally, we provide an overview of the effects of salt and temperature and briefly discuss the effects of contour length and sequence dependence.
我们回顾了使用单分子力谱技术推断核酸弹性性质的现有知识。我们强调了单链 DNA 鲜为人知的弹性性质。我们讨论了在拉伸实验中准确确定弹性响应的重要性,并回顾了用于合理化实验数据的最简单模型以及用于拉伸单链 DNA 的实验方法。还强调了用于研究 DNA 构象转变和二级结构形成的应用。最后,我们概述了盐和温度的影响,并简要讨论了轮廓长度和序列依赖性的影响。