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60名不相关的印度I型和II型黏多糖贮积症患者中20种新型致病变异的鉴定与特征分析

Identification and characterization of 20 novel pathogenic variants in 60 unrelated Indian patients with mucopolysaccharidoses type I and type II.

作者信息

Uttarilli A, Ranganath P, Matta D, Md Nurul Jain J, Prasad K, Babu A S, Girisha K M, Verma I C, Phadke S R, Mandal K, Puri R D, Aggarwal S, Danda S, Sankar V H, Kapoor S, Bhat M, Gowrishankar K, Hasan A Q, Nair M, Nampoothiri S, Dalal A

机构信息

Diagnostics Division, Centre for DNA Fingerprinting and Diagnostics, Hyderabad, India.

Graduate Studies, Manipal University, Manipal, India.

出版信息

Clin Genet. 2016 Dec;90(6):496-508. doi: 10.1111/cge.12795. Epub 2016 May 26.

Abstract

Mucopolysaccharidoses (MPS), a subgroup of lysosomal storage disorders, are caused due to deficiency of specific lysosomal enzyme involved in catabolism of glycosaminoglycans. To date more than 200 pathogenic variants in the alpha-l-iduronidase (IDUA) for MPS I and ∼500 pathogenic variants in the iduronate-2-sulphatase (IDS) for MPS II have been reported worldwide. The mutation spectrum of MPS type I and MPS type II disorders in Indian population is not characterized yet. In this study, we carried out clinical, biochemical, molecular and in silico analyses to establish the mutation spectrum of MPS I and MPS II in the Indian population. We conducted molecular analysis for 60 MPS-affected patients [MPS I (n = 30) (Hurler syndrome = 17, Hurler-Scheie syndrome = 13), and MPS II (n = 30) (severe = 18, attenuated = 12)] and identified a total of 44 [MPS I (n = 22) and MPS II (n = 22)] different pathogenic variants comprising missense, nonsense, frameshift, gross deletions and splice site variants. A total of 20 [MPS I (n = 14), and MPS II (n = 6)] novel pathogenic sequence variants were identified in our patient cohort. We found that 32% of pathogenic variants detected in IDUA were recurrent and 25% in MPS II. This is the first study revealing the mutation spectrum of MPS I and MPS II patients in the Indian population.

摘要

黏多糖贮积症(MPS)是溶酶体贮积症的一个亚组,由参与糖胺聚糖分解代谢的特定溶酶体酶缺乏引起。迄今为止,全球已报道了MPS I型α-L-艾杜糖醛酸酶(IDUA)的200多个致病变异和MPS II型艾杜糖醛酸-2-硫酸酯酶(IDS)的约500个致病变异。印度人群中MPS I型和MPS II型疾病的突变谱尚未明确。在本研究中,我们进行了临床、生化、分子和计算机模拟分析,以确定印度人群中MPS I型和MPS II型的突变谱。我们对60例受MPS影响的患者进行了分子分析[MPS I型(n = 30)(Hurler综合征 = 17例,Hurler-Scheie综合征 = 13例),以及MPS II型(n = 30)(重型 = 18例,轻型 = 12例)],共鉴定出44个[MPS I型(n = 22)和MPS II型(n = 22)]不同的致病变异,包括错义、无义、移码、大片段缺失和剪接位点变异。在我们的患者队列中总共鉴定出20个[MPS I型(n = 14)和MPS II型(n = 6)]新的致病序列变异。我们发现,在IDUA中检测到的32%的致病变异是复发性的,在MPS II中为25%。这是第一项揭示印度人群中MPS I型和MPS II型患者突变谱的研究。

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