Shimosaka Takahiro, Tomita Hiroya, Atomi Haruyuki
Department of Synthetic Chemistry and Biological Chemistry, Graduate School of Engineering, Kyoto University, Kyoto, Japan.
Department of Synthetic Chemistry and Biological Chemistry, Graduate School of Engineering, Kyoto University, Kyoto, Japan
J Bacteriol. 2016 Jun 27;198(14):1993-2000. doi: 10.1128/JB.00077-16. Print 2016 Jul 15.
Regulation of coenzyme A (CoA) biosynthesis in bacteria and eukaryotes occurs through feedback inhibition targeting type I and type II pantothenate kinase (PanK), respectively. In contrast, the activity of type III PanK is not affected by CoA. As the hyperthermophilic bacterium Thermotoga maritima harbors only a single type III PanK (Tm-PanK), here we examined the mechanisms that regulate CoA biosynthesis in this organism. We first examined the enzyme responsible for the ketopantoate reductase (KPR) reaction, which is the target of feedback inhibition in archaea. A classical KPR homolog was not present on the T. maritima genome, but we found a homolog (TM0550) of the ketol-acid reductoisomerase (KARI) from Corynebacterium glutamicum, which exhibits KPR activity. The purified TM0550 protein displayed both KPR and KARI activities and was designated Tm-KPR/KARI. When T. maritima cell extract was subjected to anion-exchange chromatography, the fractions containing high levels of KPR activity also displayed positive signals in a Western blot analysis using polyclonal anti-TM0550 protein antisera, strongly suggesting that Tm-KPR/KARI was the major source of KPR activity in the organism. The KPR activity of Tm-KPR/KARI was not inhibited in the presence of CoA. We thus examined the properties of Tm-PanK and the pantothenate synthetase (Tm-PS) of this organism. Tm-PS was not affected by CoA. Surprisingly however, Tm-PanK was inhibited by CoA, with almost complete inhibition in the presence of 400 μM CoA. Our results suggest that CoA biosynthesis in T. maritima is regulated by feedback inhibition targeting PanK, although Tm-PanK is a type III enzyme.
Bacteria and eukaryotes regulate the biosynthesis of coenzyme A (CoA) by feedback inhibition targeting type I or type II pantothenate kinase (PanK). The hyperthermophilic bacterium Thermotoga maritima harbors a single type III PanK (Tm-PanK), previously considered to be unaffected by CoA. By examining the properties of three enzymes involved in CoA biosynthesis in this organism, we found that Tm-PanK, although a type III enzyme, is inhibited by CoA. The results provide a feasible explanation of how CoA biosynthesis is regulated in T. maritima, which may also apply for other bacteria that harbor only type III PanK enzymes.
细菌和真核生物中辅酶A(CoA)生物合成的调节分别通过对I型和II型泛酸激酶(PanK)的反馈抑制来实现。相比之下,III型PanK的活性不受CoA影响。由于嗜热栖热菌仅含有一种III型PanK(Tm-PanK),因此我们在此研究了该生物体中调节CoA生物合成的机制。我们首先研究了负责酮泛解酸还原酶(KPR)反应的酶,该反应是古菌中反馈抑制的靶点。嗜热栖热菌基因组上不存在经典的KPR同源物,但我们发现了来自谷氨酸棒杆菌的酮醇酸还原异构酶(KARI)的同源物(TM0550),其具有KPR活性。纯化的TM0550蛋白同时具有KPR和KARI活性,被命名为Tm-KPR/KARI。当嗜热栖热菌细胞提取物进行阴离子交换色谱分析时,含有高水平KPR活性的组分在使用抗TM0550蛋白多克隆抗血清的蛋白质印迹分析中也显示出阳性信号,强烈表明Tm-KPR/KARI是该生物体中KPR活性的主要来源。Tm-KPR/KARI的KPR活性在CoA存在下不受抑制。因此,我们研究了该生物体的Tm-PanK和泛酸合成酶(Tm-PS)的特性。Tm-PS不受CoA影响。然而,令人惊讶的是,Tm-PanK受到CoA的抑制,在400μM CoA存在下几乎完全被抑制。我们的结果表明,尽管Tm-PanK是III型酶,但嗜热栖热菌中的CoA生物合成通过对PanK的反馈抑制来调节。
细菌和真核生物通过对I型或II型泛酸激酶(PanK)的反馈抑制来调节辅酶A(CoA)的生物合成。嗜热栖热菌含有一种III型PanK(Tm-PanK),以前认为其不受CoA影响。通过研究该生物体中参与CoA生物合成的三种酶的特性,我们发现Tm-PanK尽管是III型酶,但仍受CoA抑制。这些结果为嗜热栖热菌中CoA生物合成的调节方式提供了一个可行的解释,这也可能适用于其他仅含有III型PanK酶的细菌。