Maria Vera L, Amorim Mónica J B, Bebianno Maria João, Dondero Francesco
CIMA, Faculty of Science and Technology, University of Algarve, 8005-139 Faro, Portugal; CESAM, Department of Biology, University of Aveiro, 3830-169 Aveiro, Portugal.
CESAM, Department of Biology, University of Aveiro, 3830-169 Aveiro, Portugal.
Mar Environ Res. 2016 Aug;119:31-9. doi: 10.1016/j.marenvres.2016.05.010. Epub 2016 May 10.
The transcriptomic effects of Ibuprofen (IBU) in the digestive gland tissue of Mytilus galloprovincialis Lam. specimens exposed at low environmental concentrations (250 ng L(-1)) are presented. Using a 1.7 K feature cDNA microarray along with linear models and empirical Bayes statistical methods 225 differentially expressed genes were identified in mussels treated with IBU across a 15-day period. Transcriptional dynamics were typical of an adaptive response with a peak of gene expression change at day-7 (177 features, representing about 11% of sequences available for analysis) and an almost full recovery at the end of the exposure period. Functional genomics by means of Gene Ontology term analysis unraveled typical mussel stress responses i.e. aminoglycan (chitin) metabolic processes but also more specific effects such as the regulation of NF-κB transcription factor activity.
本文介绍了低环境浓度(250 ng L(-1))下暴露的加利福尼亚贻贝(Mytilus galloprovincialis Lam.)标本消化腺组织中布洛芬(IBU)的转录组效应。使用1.7K特征cDNA微阵列以及线性模型和经验贝叶斯统计方法,在15天的时间里,在接受IBU处理的贻贝中鉴定出225个差异表达基因。转录动力学是适应性反应的典型特征,基因表达变化在第7天达到峰值(177个特征,约占可分析序列的11%),在暴露期结束时几乎完全恢复。通过基因本体术语分析进行的功能基因组学揭示了典型贻贝应激反应,即氨基聚糖(几丁质)代谢过程,以及更具体的影响,如NF-κB转录因子活性的调节。