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草鱼(Ctenopharyngodon idellus)unc45肌球蛋白伴侣b(unc45b)基因的克隆、分子特征及表达分析

Cloning, molecular characterization, and expression analysis of the unc45 myosin chaperone b(unc45b)gene of grass carp (Ctenopharyngodon idellus).

作者信息

Hu Jing, Guo Ting, Pan Wen-Qian, Gan Tian, Wei Jing, Wang Jun-Peng, Leng Xiang-Jun, Li Xiao-Qin

机构信息

The College of Fisheries and Life Science, Shanghai Ocean University, No. 999, Huchenghuan Road, Shanghai, 201306, China.

Key Laboratory of Freshwater Fishery Germplasm Resources, Ministry of Agriculture, No. 999, Huchenghuan Road, Shanghai, 201306, China.

出版信息

J Muscle Res Cell Motil. 2016 Jun;37(3):71-81. doi: 10.1007/s10974-016-9445-5. Epub 2016 Jun 22.

Abstract

Unc45 myosin chaperone b(unc45b)gene is a molecular chaperone that mediates the folding, assembly and accumulation of thick-filament myosin in the formation of sarcomere, which plays an important role in the development of striated muscle and the stability of sarcomere. In this study, the complete cDNA sequence of unc45b gene of grass carp was obtained by rapid amplification of cDNA ends (RACE), and the characteristics of the unc45b protein predicted from gene sequence was analyzed by bioinformatics methods. The differential expression pattern in tissues was also detected by quantitative real-time PCR. The results showed that the full-length of unc45b gene of grass carp is 3163 bp, which contains a 60 bp 5'UTR, a 298 bp 3'UTR, and a 2865 bp open reading frame (ORF) encoding a 934 amino acid peptide. The deduced unc45b protein exhibits a homology of 92, 86, 86 % with the protein of zebrafish (Danio rerio), channel catfish (Ietalurus punctatus) and tilapia (Oreochromis niloticus) respectively, and the protein contains UCS myosin head binding domain and TPR peptide repeat domain. The protein is a hydrophilic and non-secretory protein with a molecular mass and isoeletronic point of 103,699.8 and 7.39 Da. The structural elements of the protein includes α-helixes and loops, and the unc45b gene highly expresses in skeletal muscle and heart in grass carp. This study laid a foundation for further research in explaining the myofibril accumulation in crisped grass carp.

摘要

Unc45肌球蛋白伴侣b(unc45b)基因是一种分子伴侣,在肌节形成过程中介导粗肌丝肌球蛋白的折叠、组装和积累,对横纹肌发育和肌节稳定性起重要作用。本研究通过cDNA末端快速扩增(RACE)获得草鱼unc45b基因的完整cDNA序列,利用生物信息学方法分析该基因序列预测的unc45b蛋白特性,并通过实时定量PCR检测其在组织中的差异表达模式。结果显示,草鱼unc45b基因全长3163 bp,其中5'UTR为60 bp,3'UTR为298 bp,开放阅读框(ORF)为2865 bp,编码934个氨基酸的肽段。推导的unc45b蛋白与斑马鱼(Danio rerio)、斑点叉尾鮰(Ietalurus punctatus)和罗非鱼(Oreochromis niloticus)的蛋白序列同源性分别为92%、86%和86%,该蛋白含有UCS肌球蛋白头部结合结构域和TPR肽重复结构域。该蛋白为亲水性非分泌蛋白,分子量为103,699.8 Da,等电点为7.39。其结构元件包括α螺旋和环,unc45b基因在草鱼骨骼肌和心脏中高表达。本研究为进一步解释脆肉鲩肌原纤维积累机制奠定了基础。

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