Suppr超能文献

猛禽腺病毒1纤维头部的晶体结构及β-发夹在禽腺病毒纤维头部结构域中的作用

Crystal structure of raptor adenovirus 1 fibre head and role of the beta-hairpin in siadenovirus fibre head domains.

作者信息

Nguyen Thanh H, Ballmann Mónika Z, Do Huyen T, Truong Hai N, Benkő Mária, Harrach Balázs, van Raaij Mark J

机构信息

Departamento de Estructura de Macromoléculas, Centro Nacional de Biotecnología (CNB-CSIC), Calle Darwin 3, E-28049, Madrid, Spain.

Genetic Engineering Laboratory, Institute of Biotechnology (IBT-VAST), 18 Hoang Quoc Viet, Cau Giay, Hanoi, Vietnam.

出版信息

Virol J. 2016 Jun 22;13:106. doi: 10.1186/s12985-016-0558-7.

Abstract

BACKGROUND

Most adenoviruses recognize their host cells via an interaction of their fibre head domains with a primary receptor. The structural framework of adenovirus fibre heads is conserved between the different adenovirus genera for which crystal structures have been determined (Mastadenovirus, Aviadenovirus, Atadenovirus and Siadenovirus), but genus-specific differences have also been observed. The only known siadenovirus fibre head structure, that of turkey adenovirus 3 (TAdV-3), revealed a twisted beta-sandwich resembling the reovirus fibre head architecture more than that of other adenovirus fibre heads, plus a unique beta-hairpin embracing a neighbouring monomer. The TAdV-3 fibre head was shown to bind sialyllactose.

METHODS

Raptor adenovirus 1 (RAdV-1) fibre head was expressed, crystallized and its structure was solved and refined at 1.5 Å resolution. The structure could be solved by molecular replacement using the TAdV-3 fibre head structure as a search model, despite them sharing a sequence identity of only 19 %. Versions of both the RAdV-1 and TAdV-3 fibre heads with their beta-hairpin arm deleted were prepared and their stabilities were compared with the non-mutated proteins by a thermal unfolding assay.

RESULTS

The structure of the RAdV-1 fibre head contains the same twisted ABCJ-GHID beta-sandwich and beta-hairpin arm as the TAdV-3 fibre head. However, while the predicted electro-potential surface charge of the TAdV-3 fibre head is mainly positive, the RAdV-1 fibre head shows positively and negatively charged patches and does not appear to bind sialyllactose. Deletion of the beta-hairpin arm does not affect the structure of the raptor adenovirus 1 fibre head and only affects the stability of the RAdV-1 and TAdV-3 fibre heads slightly.

CONCLUSIONS

The high-resolution structure of RAdV-1 fibre head is the second known structure of a siadenovirus fibre head domain. The structure shows that the siadenovirus fibre head structure is conserved, but differences in the predicted surface charge suggest that RAdV-1 uses a different natural receptor for cell attachment than TAdV-3. Deletion of the beta-hairpin arm shows little impact on the structure and stability of the siadenovirus fibre heads.

摘要

背景

大多数腺病毒通过其纤维头部结构域与主要受体的相互作用来识别宿主细胞。在已确定晶体结构的不同腺病毒属( Mastadenovirus、Aviadenovirus、Atadenovirus和Siadenovirus)之间,腺病毒纤维头部的结构框架是保守的,但也观察到了属特异性差异。唯一已知的Siadenovirus纤维头部结构,即火鸡腺病毒3(TAdV-3)的结构,显示出一种扭曲的β-折叠三明治结构,与呼肠孤病毒纤维头部结构的相似性超过其他腺病毒纤维头部结构,此外还有一个独特的β-发夹环绕着相邻的单体。已证明TAdV-3纤维头部能结合唾液乳糖。

方法

表达了猛禽腺病毒1(RAdV-1)纤维头部,进行了结晶,并在1.5 Å分辨率下解析并优化了其结构。尽管RAdV-1和TAdV-3的序列同一性仅为19%,但该结构可以通过以TAdV-3纤维头部结构作为搜索模型进行分子置换来解析。制备了RAdV-1和TAdV-3纤维头部β-发夹臂缺失的变体,并通过热变性分析将它们的稳定性与未突变的蛋白质进行比较。

结果

RAdV-1纤维头部的结构与TAdV-3纤维头部包含相同的扭曲ABCJ-GHIDβ-折叠三明治和β-发夹臂。然而,虽然TAdV-3纤维头部预测的电势表面电荷主要为正,但RAdV-1纤维头部显示出带正电和负电的区域,并且似乎不结合唾液乳糖。β-发夹臂的缺失不影响猛禽腺病毒1纤维头部的结构,仅对RAdV-1和TAdV-3纤维头部的稳定性有轻微影响。

结论

RAdV-1纤维头部的高分辨率结构是已知的第二个Siadenovirus纤维头部结构域结构。该结构表明Siadenovirus纤维头部结构是保守的,但预测表面电荷的差异表明RAdV-1与TAdV-3在细胞附着时使用不同的天然受体。β-发夹臂的缺失对Siadenovirus纤维头部的结构和稳定性影响很小。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1b81/4918002/48e2fcf23f70/12985_2016_558_Fig1_HTML.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验