Verma Priyanka, Dalal Krishna, Chopra Madhu
Department of Biophysics, All India Institute of Medical Sciences, Ansari Nagar, New Delhi, 110029, India.
Laboratory of Molecular Modeling & Drug Design, Dr. B. R. Ambedkar Center for Biomedical Research, University of Delhi, Delhi, 110007, India.
J Mol Model. 2016 Aug;22(8):178. doi: 10.1007/s00894-016-3035-8. Epub 2016 Jul 11.
In the development of osteoarthritis, aggrecan degrades prior to cartilage destruction. Aggrecanase-1 (ADAMTS-4) is considered to be the major enzyme responsible for cleaving the Glu373-Ala374 bond in the interglobular domain of aggrecan in humans. Therefore, inhibitors of ADAMTS-4 have therapeutic potential in the treatment of osteoarthritis. In the present work, we developed a chemical feature based pharmacophore model of ADAMTS-4 inhibitors using the HipHop module within the Catalyst program package in order to elucidate the structure-activity relationship and to carry out in-silico screening. The Maybridge database was screened using Hypo1 as a 3D query, and the best-fit hits that followed Lipinski's rule of five were subsequently screened to select the compounds. The hit compounds were then docked into the active site of ADAMTS-4, and interactions were visualized to determine the potential lead molecules. After subjecting all of the hits to various screening and filtering processes, 13 compounds were finally evaluated for their in vitro inhibitory activities. This study resulted in the identification of two lead compounds with potent inhibitory effects on ADAMTS-4 activity, with IC50 values of 0.042 μM and 0.028 μM, respectively. These results provide insight into the pharmacophoric requirements for the development of more potent ADAMTS-4 inhibitors. Graphical Abstract The aggrecan-degrading metalloprotease ADAMTS-4 has been identified as a novel therapeutic target for osteoarthritis. In this work, we used HipHop-based pharmacophore modeling and virtual screening of the Maybridge database to identify novel ADAMTS-4 inhibitors. These novel lead compounds act as potent and specific inhibitors for the ADAMTS-4 enzyme and could have therapeutic potential in the treatment of OA.
在骨关节炎的发展过程中,聚集蛋白聚糖在软骨破坏之前就会降解。聚集蛋白聚糖酶-1(ADAMTS-4)被认为是负责切割人类聚集蛋白聚糖球状间结构域中Glu373-Ala374键的主要酶。因此,ADAMTS-4抑制剂在骨关节炎治疗中具有治疗潜力。在本研究中,我们使用Catalyst程序包中的HipHop模块开发了基于化学特征的ADAMTS-4抑制剂药效团模型,以阐明构效关系并进行虚拟筛选。使用Hypo1作为三维查询对Maybridge数据库进行筛选,随后对符合Lipinski五规则的最佳命中化合物进行筛选以选择化合物。然后将命中的化合物对接至ADAMTS-4的活性位点,并可视化相互作用以确定潜在的先导分子。在对所有命中化合物进行各种筛选和过滤过程后,最终对13种化合物的体外抑制活性进行了评估。本研究鉴定出两种对ADAMTS-4活性具有强效抑制作用的先导化合物,其IC50值分别为0.042 μM和0.028 μM。这些结果为开发更有效的ADAMTS-4抑制剂的药效团要求提供了见解。图形摘要 聚集蛋白聚糖降解金属蛋白酶ADAMTS-4已被确定为骨关节炎的新型治疗靶点。在这项工作中,我们使用基于HipHop的药效团建模和Maybridge数据库的虚拟筛选来鉴定新型ADAMTS-4抑制剂。这些新型先导化合物作为ADAMTS-4酶的强效和特异性抑制剂,在骨关节炎治疗中可能具有治疗潜力。