Instituto de Tecnologia Química e Biológica NOVA, Avenida da República (EAN), Oeiras, 2780-157, Portugal.
School of Biosciences, University of Kent, Giles Lane, Canterbury, Kent, CT2 7NJ, UK.
Environ Microbiol. 2017 Jan;19(1):106-118. doi: 10.1111/1462-2920.13479. Epub 2016 Aug 25.
The sulfate-reducing bacteria of the Desulfovibrio genus make three distinct modified tetrapyrroles, haem, sirohaem and adenosylcobamide, where sirohydrochlorin acts as the last common biosynthetic intermediate along the branched tetrapyrrole pathway. Intriguingly, D. vulgaris encodes two sirohydrochlorin chelatases, CbiK and CbiK , that insert cobalt/iron into the tetrapyrrole macrocycle but are thought to be distinctly located in the periplasm and cytoplasm respectively. Fusing GFP onto the C-terminus of CbiK confirmed that the protein is transported to the periplasm. The structure-function relationship of CbiK was studied by constructing eleven site-directed mutants and determining their chelatase activities, oligomeric status and haem binding abilities. Residues His154 and His216 were identified as essential for metal-chelation of sirohydrochlorin. The tetrameric form of the protein is stabilized by Arg54 and Glu76, which form hydrogen bonds between two subunits. His96 is responsible for the binding of two haem groups within the main central cavity of the tetramer. Unexpectedly, CbiK is shown to bind two additional haem groups through interaction with His103. Thus, although still retaining cobaltochelatase activity, the presence of His96 and His103 in CbiK , which are absent from all other known bacterial cobaltochelatases, has evolved CbiK a new function as a haem binding protein permitting it to act as a potential haem chaperone or transporter.
脱硫弧菌属的硫酸盐还原菌会生成三种不同的修饰四吡咯,即血红素、亚血红素和腺苷钴胺素,其中亚硫酸氢氯酚是分支四吡咯途径中的最后一个共同生物合成中间体。有趣的是,D. vulgaris 编码了两种亚硫酸氢氯酚螯合酶 CbiK 和 CbiK ,它们将钴/铁插入四吡咯大环,但据认为分别位于周质和细胞质中。将 GFP 融合到 CbiK 的 C 末端,证实了该蛋白被转运到周质。通过构建十一个定点突变体并测定其螯合酶活性、寡聚状态和血红素结合能力,研究了 CbiK 的结构-功能关系。鉴定出残基 His154 和 His216 是亚硫酸氢氯酚金属螯合所必需的。Arg54 和 Glu76 稳定了四聚体形式的蛋白质,它们在两个亚基之间形成氢键。His96 负责在四聚体的主要中央腔中结合两个血红素基团。出乎意料的是,CbiK 通过与 His103 的相互作用显示出结合另外两个血红素基团的能力。因此,尽管仍然保留钴螯合酶活性,但 CbiK 中的 His96 和 His103 存在,而所有其他已知的细菌钴螯合酶都不存在,这使得 CbiK 具有了新的功能,成为一种血红素结合蛋白,使其能够充当潜在的血红素伴侣或转运体。