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甾体分子的16α-羟基化及同源建模的细胞色素P450-2C11中的区域选择性结合模式研究

Studies on 16α-Hydroxylation of Steroid Molecules and Regioselective Binding Mode in Homology-Modeled Cytochrome P450-2C11.

作者信息

Ali Hamed I, Yamada Morio, Fujita Yukihisa, Maeda Mitsuko, Akaho Eiichi

机构信息

Faculty of Pharmacy, Helwan University, Ain Helwan, Cairo 11795, Egypt.

Department of Chemistry, Hyogo College of Medicine, 1-1, Mukogawa-cho, Nishinomiya, Hyogo 663-8501, Japan.

出版信息

Int J Med Chem. 2011;2011:918168. doi: 10.1155/2011/918168. Epub 2010 Jul 27.

Abstract

We investigated the 16α-hydroxylation of steroid molecules and regioselective binding mode in homology-modeled cytochrome P450-2C11 to correlate the biological study with the computational molecular modeling. It revealed that there was a positive relationship between the observed inhibitory potencies and the binding free energies. Docking of steroid molecules into this homology-modeled CYP2C11 indicated that 16α-hydroxylation is favored with steroidal molecules possessing the following components, (1) a bent A-B ring configuration (5β-reduced), (2) C-3 α-hydroxyl group, (3) C-17β-acetyl group, and (4) methyl group at both the C-18 and C-19. These respective steroid components requirements were defined as the inhibitory contribution factor. Overall studies of the male rat CYP2C11 metabolism revealed that the above-mentioned steroid components requirements were essential to induce an effective inhibition of [(3)H]progesterone 16α-hydroxylation. As far as docking of homology-modeled CYP2C11 against investigated steroids is concerned, they are docked at the active site superimposed with flurbiprofen. It was also found that the distance between heme iron and C16α-H was between 4 to 6 Å and that the related angle was in the range of 180 ± 45°.

摘要

我们研究了甾体分子的16α-羟基化以及同源建模的细胞色素P450-2C11中的区域选择性结合模式,以将生物学研究与计算分子建模相关联。结果表明,观察到的抑制效力与结合自由能之间存在正相关关系。将甾体分子对接至该同源建模的CYP2C11表明,具有以下结构的甾体分子有利于16α-羟基化:(1)A-B环呈弯曲构型(5β-还原),(2)C-3α-羟基,(3)C-17β-乙酰基,以及(4)C-18和C-19处均有甲基。这些各自的甾体结构要求被定义为抑制贡献因子。对雄性大鼠CYP2C11代谢的整体研究表明,上述甾体结构要求对于有效抑制[(3)H]孕酮16α-羟基化至关重要。就同源建模的CYP2C11与所研究甾体的对接而言,它们对接在与氟比洛芬重叠的活性位点处。还发现血红素铁与C16α-H之间的距离在4至6埃之间,且相关角度在180±45°范围内。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1964/4970648/988a346ca179/IJMC2011-918168.001.jpg

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