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全外显子测序在既往未确诊的儿科神经疾病患者基因诊断中的应用

Utility of Whole Exome Sequencing for Genetic Diagnosis of Previously Undiagnosed Pediatric Neurology Patients.

作者信息

Kuperberg Maya, Lev Dorit, Blumkin Lubov, Zerem Ayelet, Ginsberg Mira, Linder Ilan, Carmi Nirit, Kivity Sarah, Lerman-Sagie Tally, Leshinsky-Silver Esther

机构信息

Metabolic-Neurogenetic Service, Wolfson Medical Center, Holon, Israel

Institute of Medical Genetics, Wolfson Medical Center, Holon, Israel.

出版信息

J Child Neurol. 2016 Dec;31(14):1534-1539. doi: 10.1177/0883073816664836. Epub 2016 Aug 29.

Abstract

Whole exome sequencing enables scanning a large number of genes for relatively low costs. The authors investigate its use for previously undiagnosed pediatric neurological patients. This retrospective cohort study performed whole exome sequencing on 57 patients of "Magen" neurogenetic clinics, with unknown diagnoses despite previous workup. The authors report on clinical features, causative genes, and treatment modifications and provide an analysis of whole exome sequencing utility per primary clinical feature. A causative gene was identified in 49.1% of patients, of which 17 had an autosomal dominant mutation, 9 autosomal recessive, and 2 X-linked. The highest rate of positive diagnosis was found for patients with developmental delay, ataxia, or suspected neuromuscular disease. Whole exome sequencing warranted a definitive change of treatment for 5 patients. Genetic databases were updated accordingly. In conclusion, whole exome sequencing is useful in obtaining a high detection rate for previously undiagnosed disorders. Use of this technique could affect diagnosis, treatment, and prognostics for both patients and relatives.

摘要

全外显子组测序能够以相对较低的成本对大量基因进行扫描。作者们研究了其在先前未确诊的儿科神经疾病患者中的应用。这项回顾性队列研究对“马根”神经遗传学诊所的57名患者进行了全外显子组测序,尽管此前进行了检查,但诊断仍不明确。作者们报告了临床特征、致病基因和治疗调整情况,并针对每个主要临床特征对全外显子组测序的效用进行了分析。在49.1%的患者中鉴定出了致病基因,其中17例为常染色体显性突变,9例为常染色体隐性突变,2例为X连锁突变。发育迟缓、共济失调或疑似神经肌肉疾病患者的阳性诊断率最高。全外显子组测序使5名患者的治疗有了明确改变。相应地更新了基因数据库。总之,全外显子组测序有助于对先前未确诊的疾病获得较高的检出率。这项技术的应用可能会影响患者及其亲属的诊断、治疗和预后。

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