College of Pharmacy, Dalhousie University , 5968 College Street, Halifax, Nova Scotia B3H 3J5, Canada.
Department of Chemistry, Dalhousie University , Halifax, Nova Scotia B3H 4R2, Canada.
J Org Chem. 2016 Oct 7;81(19):8816-8825. doi: 10.1021/acs.joc.6b01485. Epub 2016 Sep 12.
Eight fluorinated isosteric α-d-glucopyranosyl 1-phosphate (Glc 1P) analogues have been synthesized. A promiscuity investigation of the thymidylyltransferase Cps2L and the guanidylyltansferase GDP-ManPP with these analogues showed that all were accepted by either enzyme, with the exception of 1,6-diphosphate 6. Kinetic parameters were determined for these analogues using a continuous coupled assay. These data demonstrated the broad substrate promiscuity of Cps2L, with k/K changes for monofluoro substitution at C-2, C-4, and C-6 and difluoro substitution at C-2 within two orders of magnitude. In contrast, the kinetic analysis of GDP-ManPP was only possible with three out of eight analogues. The pKa values of analogues (1-3) were determined by proton decoupled P and F NMR titration experiments. Counterintuitively, the axial fluoro substituent in 3 did not change chemical shift upon titration, and there was no significant increase in acidity for the difluoro analogue over the monofluoro analogues. No strong Brønsted linear free-energy correlations were observed among all five substrates (1-3, Glc 1P, and Man 1P) for either enzyme-catalyzed reactions. However, Brønsted correlations were observed among selected substrates, indicating that the acidity of the nucleophilic phosphate and the configuration of the hexose each plays a significant role in determining the substrate specificity.
已合成了 8 种氟化同系物α-d-吡喃葡萄糖基 1-磷酸(Glc 1P)类似物。对胸苷酸基转移酶 Cps2L 和鸟苷酰基转移酶 GDP-ManPP 与这些类似物的混杂性研究表明,除了 1,6-二磷酸 6 外,所有类似物都被这两种酶接受。使用连续偶联测定法确定了这些类似物的动力学参数。这些数据表明 Cps2L 具有广泛的底物混杂性,C-2、C-4 和 C-6 处的单氟取代和 C-2 处的双氟取代的 k/K 变化幅度在两个数量级内。相比之下,仅能对 GDP-ManPP 的 3 种类似物进行动力学分析。通过质子去耦 P 和 F NMR 滴定实验确定了类似物(1-3)的 pKa 值。反直觉的是,3 中轴向氟取代基在滴定过程中没有改变化学位移,并且与单氟类似物相比,二氟类似物的酸性没有明显增加。对于两种酶催化的反应,都没有观察到所有 5 种底物(1-3、Glc 1P 和 Man 1P)之间存在强烈的 Brønsted 线性自由能相关性。然而,在选定的底物之间观察到了 Brønsted 相关性,表明亲核磷酸的酸性和己糖的构型都在确定底物特异性方面起着重要作用。