Suppr超能文献

α-血红蛋白稳定蛋白结合界面附近的突变具有高度致病性。

Mutation near the binding interfaces at α-hemoglobin stabilizing protein is highly pathogenic.

作者信息

Borgio Jesu Francis, Al-Madan Mohammed S, AbdulAzeez Sayed

机构信息

Department of Genetic Research, Institute for Research and Medical Consultation (IRMC), University of Dammam Dammam, Saudi Arabia.

Department of Pediatrics, King Fahd Hospital of the University Al-Khobar, Saudi Arabia.

出版信息

Am J Transl Res. 2016 Oct 15;8(10):4224-4232. eCollection 2016.

Abstract

Aggregation of free alpha-hemoglobin proteins forms harmful reactive oxygen radicals during the development of normal erythroid cell, which can be prevented by a chaperone, alpha hemoglobin stabilizing protein (AHSP). Mutations at the gene may affect its interacting ability with other globin proteins. Various state-of-the-art tools have been extensively used to identify the most deleterious nsSNPs at the AHSP and their pathogenic effect during AHSP-globin interaction. Comprehensive analysis revealed that the V56G of the AHS protein is the most pathogenic amino acid substitution, agreed consistently and significantly () by all the state-of-the-art tools (PROVEAN <-2.5, SIFT=0, SNAP2 >50, SNPs&GO >0.5, PolyPhen >0.5, FATHMM >0.6, PANTHER <-3, VEST P<0.05) and protein-protein interaction analysis. The V56G exists near the hot spot and was found to be the highly pathogenic and it forms an extra helix on mutation. The unchaperoned HBA2 and KLF1 proteins with the AHSP mutant (V56G) chains denote the non-interactive nature. Binding energies were significantly varied upon highly deleterious mutation at and/or gene. The study endorses the mutated AHSP protein, p.val56Gly for detailed confirmatory wet lab analysis.

摘要

在正常红系细胞发育过程中,游离的α-血红蛋白蛋白聚集会形成有害的活性氧自由基,而伴侣蛋白α-血红蛋白稳定蛋白(AHSP)可以预防这种情况。该基因的突变可能会影响其与其他珠蛋白的相互作用能力。各种先进工具已被广泛用于识别AHSP上最有害的非同义单核苷酸多态性(nsSNPs)及其在AHSP-珠蛋白相互作用过程中的致病作用。综合分析表明,AHS蛋白的V56G是最具致病性的氨基酸替代,所有先进工具(PROVEAN<-2.5,SIFT = 0,SNAP2>50,SNPs&GO>0.5,PolyPhen>0.5,FATHMM>0.6,PANTHER<-3,VEST P<0.05)和蛋白质-蛋白质相互作用分析均一致且显著()认可这一点。V56G存在于热点附近,被发现具有高度致病性,并且在突变时会形成一个额外的螺旋。带有AHSP突变体(V56G)链的无伴侣HBA2和KLF1蛋白表现出非相互作用的性质。在该基因和/或基因发生高度有害突变后,结合能发生了显著变化。该研究认可对突变的AHSP蛋白p.val56Gly进行详细的验证性湿实验室分析。

相似文献

1
2
Alpha-hemoglobin stabilizing protein (AHSP), a kinetic scheme of the action of a human mutant, AHSPV56G.
J Biol Chem. 2010 Jun 4;285(23):17986-92. doi: 10.1074/jbc.M109.098491. Epub 2010 Apr 6.
3
In-Silico Computing of the Most Deleterious nsSNPs in HBA1 Gene.
PLoS One. 2016 Jan 29;11(1):e0147702. doi: 10.1371/journal.pone.0147702. eCollection 2016.
5
Biophysical characterization of the alpha-globin binding protein alpha-hemoglobin stabilizing protein.
J Biol Chem. 2002 Oct 25;277(43):40602-9. doi: 10.1074/jbc.M206084200. Epub 2002 Aug 20.
8
Analysis of human alpha globin gene mutations that impair binding to the alpha hemoglobin stabilizing protein.
Blood. 2009 Jun 4;113(23):5961-9. doi: 10.1182/blood-2008-12-196030. Epub 2009 Apr 6.
9
Insights into hemoglobin assembly through in vivo mutagenesis of α-hemoglobin stabilizing protein.
J Biol Chem. 2012 Mar 30;287(14):11325-37. doi: 10.1074/jbc.M111.313205. Epub 2012 Jan 27.
10
Alpha-hemoglobin-stabilizing protein (AHSP): a modulatory factor in β-thalassemia.
Int J Hematol. 2020 Mar;111(3):352-359. doi: 10.1007/s12185-019-02806-8. Epub 2020 Jan 1.

引用本文的文献

1
Haemoglobin switching modulator SNPs rs5006884 is associated with increased HbA in β-thalassaemia carriers.
Arch Med Sci. 2019 Jul 18;17(4):1064-1074. doi: 10.5114/aoms.2019.86705. eCollection 2021.
2
Congenital dyserythropoietic anemia and drug-induced liver injury present as bland cholestasis: A case report.
Exp Ther Med. 2021 May;21(5):456. doi: 10.3892/etm.2021.9887. Epub 2021 Mar 2.
3
Emerging of composition variations of SARS-CoV-2 spike protein and human ACE2 contribute to the level of infection: approaches.
J Biomol Struct Dyn. 2022 Apr;40(6):2635-2646. doi: 10.1080/07391102.2020.1841032. Epub 2020 Nov 3.
5
Identification of seven novel variants in the β-globin gene in transfusion-dependent and normal patients.
Arch Med Sci. 2019 May 5;16(2):453-459. doi: 10.5114/aoms.2019.84825. eCollection 2020.
6
Alpha-hemoglobin-stabilizing protein (AHSP): a modulatory factor in β-thalassemia.
Int J Hematol. 2020 Mar;111(3):352-359. doi: 10.1007/s12185-019-02806-8. Epub 2020 Jan 1.
7
Molecular simulation studies on B-cell lymphoma/leukaemia 11A (BCL11A).
Am J Transl Res. 2019 Jun 15;11(6):3689-3697. eCollection 2019.
10
gene and borderline hemoglobin A in Saudi population.
Arch Med Sci. 2018 Jan;14(1):230-236. doi: 10.5114/aoms.2018.72245. Epub 2017 Dec 19.

本文引用的文献

1
In-Silico Computing of the Most Deleterious nsSNPs in HBA1 Gene.
PLoS One. 2016 Jan 29;11(1):e0147702. doi: 10.1371/journal.pone.0147702. eCollection 2016.
2
Mutations in the β-globin gene from a Saudi population: an update.
Int J Lab Hematol. 2016 Apr;38(2):e38-40. doi: 10.1111/ijlh.12463. Epub 2016 Jan 29.
3
Molecular nature of alpha-globin genes in the Saudi population.
Saudi Med J. 2015 Nov;36(11):1271-6. doi: 10.15537/smj.2015.11.12704.
5
Computational approaches to study the effects of small genomic variations.
J Mol Model. 2015 Oct;21(10):251. doi: 10.1007/s00894-015-2794-y. Epub 2015 Sep 8.
6
Alpha hemoglobin stabilizing protein: Its causal relationship with the severity of beta thalassemia.
Blood Cells Mol Dis. 2015 Aug;55(2):104-7. doi: 10.1016/j.bcmd.2015.05.005. Epub 2015 May 12.
7
Better prediction of functional effects for sequence variants.
BMC Genomics. 2015;16 Suppl 8(Suppl 8):S1. doi: 10.1186/1471-2164-16-S8-S1. Epub 2015 Jun 18.
8
The RCSB PDB "Molecule of the Month": Inspiring a Molecular View of Biology.
PLoS Biol. 2015 May 5;13(5):e1002140. doi: 10.1371/journal.pbio.1002140. eCollection 2015 May.
10
A novel HBA2 gene conversion in cis or trans: "α12 allele" in a Saudi population.
Blood Cells Mol Dis. 2014 Dec;53(4):199-203. doi: 10.1016/j.bcmd.2014.07.001. Epub 2014 Jul 25.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验