Liu Hong-Zhou, Du Chun-Xian, Luo Jing, Qiu Xue-Ping, Li Zu-Hua, Lou Qi-Yong, Yin Zhan, Zheng Fang
Center for Gene Diagnosis, Zhongnan Hospital of Wuhan University, Wuhan, Hubei, 430071, China.
Department of Pneumology, Zhongnan Hospital of Wuhan University, Wuhan, Hubei, 430071, China.
Oncotarget. 2017 Jan 10;8(2):2708-2718. doi: 10.18632/oncotarget.13156.
Two daughters in a Chinese consanguineous family were diagnosed as diffuse pulmonary arteriovenous malformations (PAVMs) and screened using whole exome sequencing (WES) and copy number variations (CNVs) chips. Though no mutation was found in the established causative genes of capillary malformation-AVMs (CM-AVMs) or PAVMs, Ser161Ile (hg19 NM_022493 c.482G>T) mutation in nuclear prelamin A recognition factor-like (NARFL) was identified. Ser161Ile mutation in NARFL conservation region was predicted to be deleterious and absent in 500 population controls and Exome Aggregation Consortium (ExAC) Database. And there was a dosage effect of the mutation on mRNA levels among family members and population controls, consistent with the instability of mutant mRNA in vitro. Accordingly, in lung tissue of the proband, NARFL protein expression was reduced but Fe3+ was overloaded with vascular endothelial growth factor (VEGF) overexpression. Furthermore, NARFL-knockdown cell lines demonstrated decreased activity of cytosolic aconitase, while NARFL-knockout zebrafish presented ectopic subintestinal vessels sprouts and upregulated VEGF. So we concluded that the Ser161Ile mutant induced NARFL deficiency and eventually diffuse PAVMs probably through VEGF pathway. In a word, we detected a functional mutation in NARFL, which might be the pathogenic gene in this pedigree.
在中国一个近亲家庭中,两名女儿被诊断为弥漫性肺动静脉畸形(PAVM),并使用全外显子组测序(WES)和拷贝数变异(CNV)芯片进行筛查。尽管在已确定的毛细血管畸形 - 动静脉畸形(CM - AVM)或PAVM的致病基因中未发现突变,但在核纤层蛋白A前体识别因子样(NARFL)中鉴定出Ser161Ile(hg19 NM_022493 c.482G>T)突变。NARFL保守区域中的Ser161Ile突变预计具有有害性,在500名人群对照和外显子聚合联盟(ExAC)数据库中均未出现。并且该突变在家庭成员和人群对照的mRNA水平上存在剂量效应,这与突变mRNA在体外的不稳定性一致。因此,在先证者的肺组织中,NARFL蛋白表达降低,但Fe3+过载且血管内皮生长因子(VEGF)过表达。此外,NARFL敲低细胞系显示胞质乌头酸酶活性降低,而NARFL敲除斑马鱼出现异位肠下血管芽生且VEGF上调。所以我们得出结论,Ser161Ile突变可能通过VEGF途径诱导NARFL缺乏并最终导致弥漫性PAVM。总之,我们在NARFL中检测到一个功能性突变,它可能是这个家系中的致病基因。