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来自宫崎F的细胞色素pH依赖性氧化还原特性中带电残基的作用

Roles of charged residues in pH-dependent redox properties of cytochrome from Miyazaki F.

作者信息

Yahata Naoki, Ozawa Kiyoshi, Tomimoto Yusuke, Morita Kumiko, Komori Hirofumi, Ogata Hideaki, Higuchi Yoshiki, Akutsu Hideo

机构信息

Institute for Protein Research, Osaka University, Yamadaoka, Suita 565-0871, Japan.

Faculty of Engineering, Yokohama National University, Hodogaya-ku, Yokohama 240-8501, Japan.

出版信息

Biophysics (Nagoya-shi). 2006 Jul 21;2:45-56. doi: 10.2142/biophysics.2.45. eCollection 2006.

Abstract

Complicated pH-properties of the tetraheme cytochrome (cyt ) from Miyazaki F (MF) were examined by the pH titrations of H-N HSQC spectra in the ferric and ferrous states. The redox-linked p shift for the propionate group at C13 of heme 1 was observed as the changes of the NH signals around it. This p shift is consistent with the redox-linked conformational alteration responsible for the cooperative reduction between hemes 1 and 2. On the other hand, large chemical shift changes caused by the protonation/deprotonation of Glu41 and/or Asp42, and His67 were redox-independent. Nevertheless, these charged residues affect the redox properties of the four hemes. Furthermore, one of interesting charged residues, Glu41, was studied by site-directed mutagenesis. E41K mutation increased the microscopic redox potentials of heme 1 by 46 and 34 mV, and heme 2 by 35 and 30 mV at the first and last reduction steps, respectively. Although global folding in the crystal structure of E41K cyt is similar to that of wild type, local change was observed in H NMR spectrum. Glu41 is important to keep the stable conformation in the region between hemes 1 and 2, controlling the redox properties of MF cyt . In contrast, the kinetic parameters for electron transfer from MF [NiFe] hydrogenase were not influenced by E41K mutation. This suggests that the region between hemes 1 and 2 is not involved in the interaction with [NiFe] hydrogenase, and it supports the idea that heme 4 is the exclusive entrance gate to accept the electron in the initial reduction stage.

摘要

通过对宫崎F(MF)四血红素细胞色素(cyt)处于高铁和亚铁状态下的¹H -¹⁵N HSQC谱进行pH滴定,研究了其复杂的pH性质。观察到血红素1的C13处丙酸根基团的氧化还原相关的pKa位移,表现为其周围NH信号的变化。这种pKa位移与负责血红素1和2之间协同还原的氧化还原相关构象改变一致。另一方面,由Glu41和/或Asp42以及His67的质子化/去质子化引起的大化学位移变化与氧化还原无关。然而,这些带电荷的残基会影响四个血红素的氧化还原性质。此外,通过定点诱变研究了其中一个有趣的带电荷残基Glu41。E41K突变在第一次和最后一次还原步骤中分别使血红素1的微观氧化还原电位增加了46和34 mV,使血红素2的微观氧化还原电位增加了35和30 mV。尽管E41K cyt的晶体结构中的整体折叠与野生型相似,但在¹H NMR谱中观察到了局部变化。Glu41对于维持血红素1和2之间区域的稳定构象很重要,它控制着MF cyt的氧化还原性质。相比之下,MF [NiFe]氢化酶电子转移的动力学参数不受E41K突变的影响。这表明血红素1和2之间的区域不参与与[NiFe]氢化酶的相互作用,并且支持血红素4是初始还原阶段接受电子的唯一入口的观点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5df8/5036644/2b9e9ad41b99/2_45f1.jpg

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