Pangavhane Sachin, Böhm Stanislav, Makrlík Emanuel, Ruzza Paolo, Kašička Václav
Electromigration Methods, The Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Prague, Czech Republic.
Faculty of Food and Biochemical Technology, University of Chemistry and Technology, Prague, Czech Republic.
Electrophoresis. 2017 Jun;38(12):1551-1559. doi: 10.1002/elps.201600474. Epub 2017 Feb 14.
ACE in a free solution and quantum mechanical density functional theory have been applied to the investigation of interactions of glycine-6-antamanide ([Gly ]AA), a synthetic derivative of cyclic decapeptide antamanide isolated from the highly poisonous mushroom Amanita phalloides, with sodium or potassium ions in methanol. First, from the dependence of effective electrophoretic mobility of [Gly ]AA on Na or K ions concentration in the BGE (methanolic solution of 20 mM chloroacetic acid, 10 mM Tris, pH 7.8, containing 0-50 mM NaCl or 0-40 mM KCl), the apparent binding (stability) constants of [Gly ]AA-Na and [Gly ]AA-K complexes were evaluated as 26 ± 1 and 14 ± 1 L/mol, respectively. The employed ACE method included correction of the effective mobilities measured at ambient temperature and at variable ionic strength of the BGEs to the mobilities related to the reference temperature 25°C and to the constant ionic strength 10 mM. Second, the interaction energies of the [Gly ]AA-Na and [Gly ]AA-K complexes (-466.3 and -345.2 kJ/mol, respectively) and the structural details of these complexes, such as position of the Na and K ions in the cavity of the [Gly ]AA molecule and the interatomic distances within these complexes, were determined by the density functional theory calculations.
将处于游离溶液状态的毛细管区带电泳(ACE)和量子力学密度泛函理论应用于研究甘氨酸 - 6 - 鹅膏毒环肽([Gly]AA)与甲醇中的钠离子或钾离子的相互作用。[Gly]AA是从剧毒蘑菇毒鹅膏中分离出的环十肽鹅膏毒环肽的合成衍生物。首先,根据[Gly]AA在背景电解质(BGE,20 mM氯乙酸、10 mM Tris的甲醇溶液,pH 7.8,含有0 - 50 mM NaCl或0 - 40 mM KCl)中的有效电泳迁移率对Na或K离子浓度的依赖性,评估[Gly]AA - Na和[Gly]AA - K配合物的表观结合(稳定性)常数分别为26±1和14±1 L/mol。所采用的ACE方法包括将在环境温度和不同离子强度的BGE中测得的有效迁移率校正为与参考温度25°C和恒定离子强度10 mM相关的迁移率。其次,通过密度泛函理论计算确定了[Gly]AA - Na和[Gly]AA - K配合物的相互作用能(分别为 - 466.3和 - 345.2 kJ/mol)以及这些配合物的结构细节,例如Na和K离子在[Gly]AA分子腔内的位置以及这些配合物内的原子间距离。