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非洲裔巴西人中的囊性纤维化:XK单倍型分析支持p.F508del突变的欧洲起源。

Cystic fibrosis in Afro-Brazilians: XK haplotypes analysis supports the European origin of p.F508del mutation.

作者信息

de Souza D A S, Faucz F R, de Alexandre R B, Santana M A, de Souza E L S, Reis F J C, Pereira-Ferrari L, Sotomaior V S, Culpi L, Phillips J A, Raskin S

机构信息

Group for Advanced Molecular Investigation (NIMA), School of Health and Biosciences, Pontifícia Universidade Católica do Paraná (PUCPR), Curitiba, Paraná, Brazil.

Functional Genomics Laboratory, Carlos Chagas Institute, Oswaldo Cruz Foundation, Curitiba, Paraná, Brazil.

出版信息

Genetica. 2017 Feb;145(1):19-25. doi: 10.1007/s10709-016-9942-x. Epub 2017 Feb 3.

Abstract

Cystic fibrosis (CF) is a common autosomal recessive disorder, being the p.F508del the most frequent mutation. Also, a nearby restriction fragment length polymorphism (RFLP) named XK (KM19 and XV2C) is non-randomly associated with specific CF alleles. Our aim was to analyze the occurrence of the p.F508del mutation and XK haplotypes in Afro-Brazilians CF patients and controls, since these data is available for the other two main ethnic groups found in Brazil (Euro-Brazilians and Brazilian Amerindians), contributing for the whole comprehension of these haplotypes in the Brazilian population. A total of 103 patients and 54 controls were studied. PCR and PCR-RFLP methodologies were used to identify the presence of the p.F508del and the XK haplotype in the subjects. The combined data show that 84.2% of p.F508del mutation is associated with haplotype B and only 15.8% with haplotype A; no other haplotypes were found to be associated with this mutation. Our data suggest that the occurrence of p.F508del mutation and haplotype B in Afro-Brazilian patients occurs probably due to admixture with Euro-descendants. Therefore this mutation and haplotype could be used as a admixture marker.

摘要

囊性纤维化(CF)是一种常见的常染色体隐性疾病,p.F508del是最常见的突变。此外,一种名为XK(KM19和XV2C)的附近限制性片段长度多态性(RFLP)与特定的CF等位基因非随机相关。我们的目的是分析非洲裔巴西CF患者和对照中p.F508del突变和XK单倍型的发生情况,因为巴西另外两个主要种族群体(欧洲裔巴西人和巴西美洲印第安人)已有这些数据,这有助于全面了解巴西人群中的这些单倍型。共研究了103例患者和54例对照。采用聚合酶链反应(PCR)和PCR-限制性片段长度多态性(PCR-RFLP)方法来确定研究对象中p.F508del和XK单倍型的存在情况。综合数据显示,84.2%的p.F508del突变与单倍型B相关,仅15.8%与单倍型A相关;未发现其他单倍型与该突变相关。我们的数据表明,非洲裔巴西患者中p.F508del突变和单倍型B的出现可能是由于与欧洲后裔的混合。因此,这种突变和单倍型可作为混合标记。

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