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基于侧向流分析的简单且高灵敏 Zika 病毒分子诊断。

Simple and Highly Sensitive Molecular Diagnosis of Zika Virus by Lateral Flow Assays.

机构信息

Department of Electrical Engineering, Kwangwoon University , 447-1 Wolgye, Nowon, Seoul 01897, Republic of Korea.

Department of Convergence Medicine, Asan Medical Center, University of Ulsan College of Medicine , Ulsan, Republic of Korea.

出版信息

Anal Chem. 2016 Dec 20;88(24):12272-12278. doi: 10.1021/acs.analchem.6b03460. Epub 2016 Nov 23.

Abstract

We have developed a simple, user-friendly, and highly sensitive Zika virus (ZIKV) detection method by incorporating optimized reverse transcription loop-mediated isothermal amplification (RT-LAMP) and a lateral flow assay (LFA). The optimized RT-LAMP reaction was carried out using Bst 3.0 polymerase, which has robust and fast isothermal amplification performance even in the presence of high concentrations of inhibitors; this permitted the amplification of ZIKV RNA in pure water and human whole blood. In addition, the strong reverse transcription activity of Bst 3.0 polymerase enabled specific ZIKV RNA amplification without extra addition of reverse transcriptase. The RT-LAMP condition was optimized by adjusting the Mg and dNTP mix concentration to extirpate nontarget amplification, which is caused by nonspecific primer dimers amplification. After 30 min of RT-LAMP reaction, the resultant amplicons were simply and rapidly analyzed by the LFA test in less than 5 min. The optimized RT-LAMP combined with the LFA allowed specific ZIKV RNA detection down to the single copy level within 35 min.

摘要

我们开发了一种简单、易用且高度敏感的寨卡病毒(ZIKV)检测方法,该方法结合了优化的逆转录环介导等温扩增(RT-LAMP)和侧向流动检测(LFA)。优化的 RT-LAMP 反应使用 Bst 3.0 聚合酶进行,即使在存在高浓度抑制剂的情况下,该聚合酶也具有强大且快速的等温扩增性能;这使得 ZIKV RNA 能够在纯水中和人体全血中进行扩增。此外,Bst 3.0 聚合酶强大的逆转录活性使得能够在不额外添加逆转录酶的情况下进行特异性 ZIKV RNA 扩增。通过调整 Mg 和 dNTP 混合物浓度来优化 RT-LAMP 条件,以消除非特异性引物二聚体扩增引起的非靶向扩增。在 30 分钟的 RT-LAMP 反应后,通过 LFA 测试在不到 5 分钟的时间内即可简单快速地分析得到的扩增产物。优化的 RT-LAMP 与 LFA 结合,可在 35 分钟内实现对单个拷贝水平的特异性 ZIKV RNA 检测。

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